Rhincodon typus (whale shark): 109935704
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Entry
109935704 CDS
T06055
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00100
Steroid biosynthesis
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
109935704 (lss)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
109935704 (lss)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
109935704
NCBI-ProteinID:
XP_048455318
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All DBs
Position
7:3166843..3256369
Genome browser
AA seq
736 aa
AA seq
DB search
MEPAAGCLRRRGGPYKTEPVTDLMHWRLSNVEGRQTWRYIDYRETEDRQQTMLELHSLGL
DTSKFTRDLPRAATPQEAVLQGMTFYAKLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIS
LSEAQRKEMIRYLRSVQLPDGGWGLHVEDKSTVFGTALNYAACRILGVGPDDPDLVRARN
NLHDKGGAVGIPSWGKFWLAILNVYSWEGMNTLFPEMWLFPRWVPAHPSTLWCHCRQVYL
PMSYCYAVRLTAQEDDLILSLRQELYIQDYSSIDWPAQRNNVAACDLYTPHSQLLTIAYA
FLNMYEDHHSTTLRKKALTELYDHIVADDRFTKCISIGPISKTINMLVRWHVEGHEAPAF
QEHVSHIPDYLWLGLDGLKMQGTNGSQLWDTAFAVQAYLEAGAQDIPEFTACLQHAHEYF
RISQVQDNPPDYDKYYRQMSKGGFSFSTRDCGWIVADCTAEGLKSIMLLQEKCPFIKDHI
SEERLFDAVNVLLSMRNPDGGFATYETKRGGRLLELLNPSEVFGDIMIDYTYVECTSAVM
QALKHFREKYPYHRVREIRDTLEKGLEYCRRMQNPDGSWEGSWGVCFTYGTWFGLEAFAC
MGHTYQKGAACRAVTRACEFLLSKQMEDGGWGEDFESCEQRKYVQSAKSQVHNTCWAVLG
LMAARYPGTRAIERGIELLMAKQLPNGDWPQENIAGVFNKTCAISYTSYRNIFPIWTLGR
FISLYPNSAQAIKLKL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcagccgggtgtttgcggagaagaggtggcccatataaaactgaaccagtt
acagatttgatgcactggaggctgtctaatgttgagggcagacagacttggaggtatatc
gactacagagaaacagaagacaggcaacagacaatgctggagctacattcactggggctt
gacactagtaaatttaccagggatttaccaagagctgcgacaccacaagaggcagttctg
cagggaatgacattttatgcaaagctacaggctgaggatggacattgggctggagactat
ggtggacccctattccttctaccagggctactgattacatgtcatgtagcaaagatatca
ttgtcagaggctcagaggaaggagatgattcgatacctgcgctcagtacagcttccagat
ggcggatggggactgcatgtggaggacaagtcaacagtgtttggaacagcgttgaattac
gcagcctgtagaatccttggtgttggaccagatgaccctgacctggtgcgggcgagaaat
aaccttcatgataaaggtggtgctgtcggaatcccatcctggggtaaattctggttggca
attcttaatgtctacagctgggaaggaatgaacaccttgtttccagagatgtggctcttc
cctcgatgggtaccagctcacccttccaccttatggtgtcactgtcggcaggtctatctc
cctatgagttactgctatgctgtccgcctcactgcacaggaagatgacctaattctcagc
ctgcgccaggagctctacattcaagactacagctccattgactggcctgcccagcgaaac
aatgtggcggcatgtgatctgtacaccccacacagccagcttctcaccattgcgtacgct
ttcctgaatatgtatgaggatcatcacagcaccactctgagaaagaaggcactcacagaa
ctctatgaccacatcgtagctgatgacagattcacaaagtgcattagcatcggaccgatt
tccaaaaccatcaacatgttggttcgctggcacgtggagggtcacgaggcccctgctttc
caggagcatgtttctcatatcccagactatctctggcttggccttgatggactgaagatg
cagggcaccaacggatctcagctgtgggatacagcttttgccgtccaggcctaccttgag
gcaggggctcaggatattccagaattcacagcctgtctccaacatgcccacgagtatttc
cgaatttctcaggttcaagacaatcctccagattatgacaagtattaccgtcaaatgagt
aaggggggtttctcattcagcactcgggactgcggctggattgtagcagattgcacagca
gaaggcttaaaatccataatgctgctgcaggagaagtgtcccttcatcaaggatcacatt
tctgaggagcgactgtttgatgccgtcaatgtgctgctcagtatgagaaaccctgacggt
gggtttgccacatacgagacaaagcgcgggggacgactgctcgaacttctgaacccctca
gaggtttttggcgatataatgattgattacacgtatgttgagtgcacatctgctgtcatg
caggcattgaaacatttccgtgagaaatatccataccacagagtgagggagatccgcgac
actttggaaaagggccttgagtactgtcggagaatgcagaatccagacgggtcatgggaa
gggagctggggtgtctgctttacctatggaacctggtttggcctggaggcttttgcctgc
atgggacacacctatcagaaaggcgctgcatgcagagcagtgacccgtgcctgcgagttc
ctgctgtccaaacagatggaagatggaggctggggcgaagactttgaatcatgtgagcaa
aggaaatatgtgcaaagtgcaaagtcccaagttcacaatacatgttgggcagtattggga
ttaatggctgccagataccctggcacacgggcaatcgagcgagggattgaactcctgatg
gcaaagcagctgccaaatggggattggcctcaggagaacattgctggtgtattcaacaaa
acctgtgcaattagttatacctcctacagaaatatcttccccatatggacactgggacga
ttcatcagcctttacccgaatagcgcccaagctatcaagctcaaactgtga
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