Rhincodon typus (whale shark): 109935784
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Entry
109935784 CDS
T06055
Name
(RefSeq) epiphycan
KO
K08127
epiphycan
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109935784
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
109935784
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
109935784
NCBI-ProteinID:
XP_048463897
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All DBs
Position
18:complement(46451691..46488539)
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AA seq
292 aa
AA seq
DB search
MKTFASVVLSGLLILEVVLAAPTKNEEKARKLKQTQSLPVDLLEEHGYVNQDPRNFFEYK
DDLIIDEPLNITSKDNIYFLVLFSGLPTCLLCTCLSGSVYCDDTDIKTIPPLPKETTHFY
ARFNKLTDIKKGDFAGLNHLKRIDVTGNRISSIDEDAFRQLPELVDLMVASNELVQLPEL
PQTMVSIDASYNKLNSSGIKNEAFKDMNNLEYLYLAGNLLNHVPIPLPESLRSINLQNNN
VQQINDDTFCNSKDIHYVRKALELIRLDGNPINLSKTPGAYICLPHVPYGNY
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaagacctttgcctctgtagtactgtcgggacttctaatccttgaggttgttcttgct
gcccctacaaaaaatgaggagaaagcaaggaaattgaaacagacacaatcattacccgtt
gatcttttagaagaacatggttatgtgaatcaggatccaagaaatttctttgagtataag
gatgacctgattattgacgaaccactgaacataacttcaaaagacaatatctattttctg
gttttattctcaggccttccaacctgccttctctgtacctgcctgagtggatctgtttac
tgtgatgacacagatatcaaaaccatacctcctctccccaaggagaccactcacttttat
gcacggttcaacaagctcaccgacataaagaaaggagattttgctgggctaaatcaccta
aagaggattgacgtgacaggtaataggatttcttcaattgatgaagatgctttcaggcag
ttgcctgaactggtcgatctgatggttgcttcaaatgaacttgtgcagcttccagagcta
ccccaaactatggtcagcattgatgcaagttacaataaattgaacagcagtgggataaag
aatgaagcattcaaagacatgaataaccttgaatatctatatctagctggcaatttattg
aatcatgttccaattcctctgcctgagagcctccgttccattaacctacagaacaacaat
gttcagcagattaacgatgacactttctgcaactcaaaggacatacactatgttcgcaag
gccctggagctcattcgactggatggaaatcccattaatcttagcaaaacacctggtgcc
tacatctgtctcccacatgtgccctatggcaattattaa
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