Rhincodon typus (whale shark): 109935785
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Entry
109935785 CDS
T06055
Symbol
kera
Name
(RefSeq) keratocan
KO
K08123
keratocan
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109935785 (kera)
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
109935785 (kera)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRRNT
LRR_14
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
109935785
NCBI-ProteinID:
XP_048449386
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MKGVIQPVLVALFFSGSIWSQDLSNYLERLEYYYECPKECRCPTTYSNALYCDSQNLKEM
PKVPSRVLYGYIQNNLIEALPDKSFKNKTQLRWINLNKNKITSGNIDKGLFQKMENLLYL
YMDDNNLEEVPAPLPSSLEYLRLARNKISRIPEGAFTNLDKLTLLDLQGNNLKDFAIDAN
TFQGLKALLQLNLAKNDLKEMPPQIPTSTLQLFLDNNSIKAIPRDYFSGLPKLSFVRLNH
NNISDTGIPETVFNMSSIIDLQLSHNQLTAVPPIHLGLEHLYLDHNQIKNINGAQVCPIP
INTINQVPSTDLQPRLRYLRLDGNGIKPPIPLELLMCFRLLTGIVI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgtgatccaacctgttctagtggctttattcttcagcggaagcatttggagc
caggacctatcaaactacttagagcgtctagaatactattatgaatgccctaaagagtgc
cgatgccccactacttattctaatgccctgtactgtgacagccaaaacctcaaagagatg
cccaaagtaccatcaagggtcttgtatgggtatattcagaacaatctcattgaagcactc
ccagataagtccttcaagaacaaaactcaattgagatggataaacctaaataagaataag
attacaagtggtaacattgataaaggtctgtttcagaaaatggaaaaccttctctacctg
tacatggatgataataatcttgaagaagtgcctgcacccttgccaagcagcttagaatat
ctgcgcctagccaggaataagatttctcgcataccagagggagctttcaccaatctggac
aaactgacattgcttgatctgcaggggaacaacctgaaagattttgccattgatgcaaac
acttttcaaggactgaaggctctactgcaactcaatttggccaagaatgacctcaaggaa
atgcccccacaaatccccacttcgactctgcaactcttcttggacaataactccattaaa
gcaataccacgggactacttcagtggacttccaaagctgtcttttgtcagactaaatcat
aacaacatttccgacactggaattcctgagactgtttttaacatgtcatccataatagac
ttgcagttatcacacaatcagctcaccgcagttccacccatccatctcggtcttgaacac
ttgtacctcgaccacaaccaaatcaaaaacattaatggagctcaggtctgccccataccc
atcaacacaattaaccaggtgccctcaacggaccttcagcctcgtctccgttacctccga
ctcgatggcaatggaatcaaacctcccattcctctagagctgttgatgtgttttagactt
ctcactgggattgtcatttaa
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