Rhincodon typus (whale shark): 109935817
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Entry
109935817 CDS
T06055
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109935817 (trappc10)
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
109935817 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_2
TPR_12
SUS_EPBD
Mad3_BUB1_I_2
Plasmid_RAQPRD
Motif
Other DBs
NCBI-GeneID:
109935817
NCBI-ProteinID:
XP_048459071
LinkDB
All DBs
Position
11:1352501..1401705
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AA seq
1247 aa
AA seq
DB search
MENRPLATCAGDQALFSSVYSILMQQLPREPMEWRRSYGRPPKMIHLEANFVQFKEELIP
KEGNRALLTFPFLHLFWTDCCDTEVYKATAKDEITKWQNILKAYSSSDWLIVVVESDAKK
KNKTNILPRTSIVDKIRNDFCNKQSDRCVVLTDPLKDSSRTQESWNAFFTKLRTLLLMSF
TKNLGKFEDEMRTMREKRTEAGWSFCEYFMVQEELAFVFEMLQQFEDALVQYDELDALFT
QYVVNYGAGDGANWLTSFCQPVRSWNGLVLRKPIDMEKRELIQKNKATLLDLRSYLFSRQ
CTLLVFLQRPWEVAQRALELLHNCVQELKLLEVSVPIGALDCWVFLSCLEVLQRIEGCCD
QVQLENNYCHTVGLWSYATEKLQSLGYLCGLISEKGPNSEELNRTVDVLAGLGAEHPETA
NSPQSPYKTLNEALSSVEAFEKHYLELSLTAFDMYKTIGQIRSAQLLGKDLADFYMHKGE
PQKASLYLQEALKTYQTEGWTLLTAHTRKQLAECQKQLQQTQNYLQTSSLLASDSNLTDT
ERVHFCQEILDLAQQPVNGQDDRFVLPMDGFVQLKRLCFNPACAVVHVGGYLDIELTVNS
LMPLPMHLDQLSIHLHLTVSKDPSKRSNEFGGRSRNASGIFLFPSEPSGNTFPRNSQPSV
ELYELYDRSLSDSSLNSSGIICKNMHLLLRRQESSSSLERPSDLPLGDAAHTLRTSNILL
QPGANIIHFNTQAKEAGIYTLRQLSASLGIVQFTLPHIYPIIQYEAYSQEPQLKVEPMTD
SLLAGISQQVKFTIQTGHYSVKNGDALQLSITDTLPILHSASSTATVSTNTGDKVSEAPL
SIQSSGKITSISLPLAAAYHQIEFELRVICHLPSTLPTPPDSEKPSAEIKTIRKGLEKTK
VDGPCMTSIEQKITVDCPWSIYSSLVSLTFNIPFNAKHSLLSSGRRKYLQVCVHNLSEIG
FQLFDPQLEEVTKYSDLTFVSLNCLKQQHIYSKQAMFFLWELKWSQDPGTSLHCQFSVAF
TPLTGQEPGLIKPFTYELKLDNFCTLYDVKAEIFPPLGAEMCKTGTLCNLEVSIVRLSDL
TEVDKDESLVDCDGYCTTKLMYEVVDNSSNWAVCGKSSGVISMPVAARATHKVHMEVMPL
FAGFLPFPDIKLFKYLPFQPSQSGQMETDNWIENDTLSVDRNLDEQVESSSMRSRGSSHS
SSSNEHRGVPMPRLLPFSSGQVFNTSSSMQILVIPSQDDHMLEVNVT
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccgtcccctagcaacctgtgcaggcgaccaagccctcttctcctctgtttac
tcaatactcatgcagcaacttccacgagagccaatggaatggagaaggtcctatgggcgg
ccaccaaagatgatccaccttgaagcgaattttgttcagtttaaagaagagctgatacct
aaagaaggaaaccgagcgcttttaaccttccctttcctgcacctattctggacagactgc
tgtgacactgaggtttacaaagcaactgcaaaggatgagatcacaaaatggcaaaacatt
ttaaaagcttacagcagctctgattggctgattgttgttgtggagagtgatgccaaaaaa
aagaataaaaccaacattctcccgcggacatcaatcgtcgacaagatcagaaatgacttc
tgcaacaaacaaagtgacagatgtgtagtgctgacagatcccctgaaggattcttcccgc
actcaggaatcttggaatgcgttcttcactaagctccgcactctgttgcttatgtcattt
accaagaacctgggaaaatttgaggatgagatgagaaccatgagagagaagaggacagag
gcaggctggagtttctgtgaatatttcatggttcaggaagagttggcgtttgtgttcgag
atgttgcaacagtttgaggacgccctagtgcagtatgatgaactcgatgcactcttcaca
caatatgtggtcaactatggtgctggagatggagccaattggctgacctctttctgccag
ccggttcgaagctggaatgggctggtgcttcgcaaaccaatcgacatggagaagagggag
ctgatccagaagaacaaggccaccctgctggatctgcgtagctatctattctcaaggcag
tgcactctgctcgtcttcctgcagagaccgtgggaggtagcacagcgagcccttgagctt
ctacacaactgtgtccaggagctgaagctgcttgaggtctctgttccaattggtgccctg
gattgctgggtcttcttgagctgccttgaggtcctgcagagaattgaaggctgttgtgat
caagtccagttggagaataattattgccacactgtcggactttggagttatgctacagaa
aagttgcagtctctgggttacctgtgtggtctgatctcggagaaaggaccaaattccgaa
gagctgaacaggacggtggatgttttagcaggattgggagctgagcaccctgaaaccgca
aacagcccacagagtccatataagaccctgaatgaagcactgtcatctgttgaggctttt
gaaaagcattacttggagctttcacttactgccttcgatatgtacaaaaccattggacaa
atacgctcagctcagctgctagggaaggatcttgctgatttctacatgcataaaggggag
cctcagaaagcatcattgtatctccaggaggcactgaagacgtaccagactgaaggctgg
accttgctaactgcccacaccaggaaacaactggcagaatgtcagaaacagcttcagcag
acccaaaactacctccagaccagcagcttgctggctagtgacagcaatctaacagataca
gaacgtgtccacttctgccaggagatcctggatctggctcagcagccagttaatgggcaa
gatgaccgcttcgtgctgccaatggatgggtttgtccaactgaagaggttatgcttcaat
ccagcatgtgctgtggtgcatgtgggaggatacttggacattgagctgactgtgaacagc
ctcatgcctctccccatgcacctcgatcaactctccattcacctgcatctcactgtgagc
aaagacccatccaagagaagcaatgaatttgggggccgcagtcggaatgcaagtgggatc
ttcctgttcccaagtgagcccagtggcaacactttcccccggaacagccagccttctgtg
gagctgtatgagctttatgaccgcagtctgtcagacagttcactcaactccagcggcatc
atctgcaagaacatgcaccttctgctgcggaggcaggagagcagcagttccctcgagcga
ccctctgacctgcctctgggcgatgcagcacacactttacgcaccagcaatatcctgctg
cagccaggagccaacatcatacacttcaacactcaggctaaggaagctgggatttacacc
ctgcgccagctctctgcctctctgggaatagtgcagttcactcttcctcacatctatcca
atcattcaatatgaagcatactctcaggaacctcagctcaaagtagagccaatgaccgac
agcctcctagcgggtatttctcaacaagtgaagttcaccatccagacaggacattactct
gtaaagaatggagacgcgctgcagctcagtatcactgacacactgccaatcctgcactca
gcgagcagcactgccacagtctcaaccaatactggggacaaagtctctgaggctccgtta
tccatccaatcgtctggaaagattaccagtatatctctgccactggctgctgcctaccat
cagatagagtttgaattacgcgtcatctgtcacctgccatccacactgcccaccccccca
gactccgagaaacccagtgccgaaataaagacaattcgcaaaggactcgagaaaactaaa
gtggatggtccttgtatgacctccattgaacagaagatcaccgtcgactgcccatggtcc
atttactcttccctggtctccctgaccttcaacattccgttcaatgctaagcactcgctt
ctatcatcgggccgaaggaagtatctgcaagtgtgtgttcacaacctgtctgaaattggg
ttccagttatttgaccctcagctggaagaagtcactaagtactcagacctgacctttgtg
tcactgaattgtctcaaacagcagcacatttacagcaaacaggccatgttcttcctgtgg
gagttaaagtggagccaggatccgggaacctctcttcactgccaattcagtgtggccttc
acaccgctaacaggccaggaaccgggcttgattaaaccgttcacctacgagcttaaactg
gacaatttctgtacattgtatgatgttaaagctgaaatcttcccacctctgggagctgag
atgtgtaaaacaggaaccctgtgcaatctggaagtgtcgattgtgcgtctgtctgacctc
accgaggtggataaggatgaatctttggtggactgtgatgggtattgtaccaccaagctg
atgtatgaagttgtcgacaacagcagtaactgggcagtgtgtggtaagagctcgggagta
atttccatgccagttgcagcccgtgccactcacaaagtgcacatggaagtgatgcctctg
tttgctggatttctcccatttcctgatatcaagctcttcaagtacctcccattccagccc
agccagtctggacaaatggagacagataattggatagagaacgacaccttgtctgtggac
agaaaccttgatgagcaggtcgagagcagtagtatgaggagccgaggtagcagccattcg
tccagcagcaatgagcaccgtggtgtcccaatgccacgcttgttaccattctccagtggc
caagtcttcaacaccagctccagcatgcagatccttgtcatccccagccaggacgaccac
atgttggaggttaatgtgacgtga
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