Rhincodon typus (whale shark): 109935822
Help
Entry
109935822 CDS
T06055
Name
(RefSeq) rho guanine nucleotide exchange factor 7-like
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109935822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109935822
Membrane trafficking [BR:
rtp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109935822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
SH3_2
CH
SH3_1
PH
SH3_9
RhoGEF67_u1
SOS1_NGEF_PH
CAMSAP_CH
DH_Alsin
ENTR1
Motif
Other DBs
NCBI-GeneID:
109935822
NCBI-ProteinID:
XP_048454186
LinkDB
All DBs
Position
6:95425976..95550599
Genome browser
AA seq
802 aa
AA seq
DB search
MSSAEQTVTWLITLGVLDSPKKTVSDPEAFLQSSLRDGVVLCRLLERLVPGSIDRIHQDP
KSEAECLSNIKEFLKGCGALRVETFDANDLYQGQNFNKILSSLVALNKVTADIGVGSDSV
CARHQSHHIKSVDSLAGSHLSLGRTSKNLPGKYRSLDMTDNSNHHMIVKAKFNFYQTNED
ELCFTKGDVIHVTRIEEGGWWEGTLNGRNGWFPSNYVREIKSNEKPVSPKSATLKSSPKG
FETPPISKSYYNVVLQNILEIECDYAEELTILLSTFLRPLQASDKLSSTDMGYLMGNLED
ICSFQQILVQSLEECTKLPESQQKVGGCFGNLMSQMKSLYLAYCANHPWAVHVLTEYSEE
LGEFMEMKGATSPGILMLTTSLSKPFMRLDKYPTLLKELERHMEEYHPDWPDIQRSMTAF
KNLSSQCQEVRKKKELELQILTETVHGWEGEDIKSLGNVIYMSQVTVQCGNEEKCERYFL
LFPHVLLMLSASPRMSAFIYQGKLPLTGLIVTRLDDSDTDKNTFEITGSMIERILVTCST
HQDLQEWVEHLQKQTKTPSVGIPVVRQQSVPCHTLPLHPVTPINKHSDGYPISVTPSYHT
LPHPSLHGTSHSSLTWGPLEPPKMPKPWSLSCLRPAAPLKPSAALCYKEDLSKSPKTMKK
LLPKRKPERKASDEEFALRKSTAALEEDTQILKVIEAYCTSAKTRQTLNSTYRKESAPQV
LLPEEEKIIVEETNSNGQTIIEEKSLVDTVYALKDEVLELKQENKKMRRSLDEEQRARKE
LEKLVRKVLKNMNDFSWDETNL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgctgagcagacggtcacttggctgattacactcggggtcctggattccccc
aagaaaacagtgtcggaccccgaggctttcctacagagctccctgagggacggggtggtc
ttgtgtcgcctcctggagcgtctggtgcctggatctatcgacaggatacatcaggacccc
aaatcagaagcagaatgtctgagcaacatcaaagagtttttgaaaggctgtggggcgctt
cgcgtggagacttttgatgccaatgacctttatcaaggacaaaacttcaacaagattctt
agttcactggtggctttgaacaaagtaactgcagacattggtgttggaagtgactcagta
tgtgcccgccaccaatcccatcatatcaagtcggttgattccctggctggatcacattta
tcacttggaagaacttctaaaaaccttccgggaaagtaccgaagtttggacatgactgat
aacagcaaccatcacatgattgtgaaagcaaaattcaacttttatcagaccaatgaggat
gaactctgctttaccaagggcgacgttatccatgtgaccagaattgaggaagggggctgg
tgggaggggacattaaatggcagaaatggatggttccccagcaattacgtgagggaaata
aaatctaatgagaaaccggtctcgccaaagtcagcaactctgaaaagttctccaaaagga
tttgaaactcctccaattagcaaaagttactacaatgtggtgctgcagaatattctggaa
atagaatgcgattatgcagaggagctaacgatacttctgtcaaccttcttgcgacctctg
caagccagtgataagttaagttctactgacatgggatatttgatgggcaacctggaagat
atttgttctttccaacaaatcctagttcagtctttagaagaatgcaccaagttgccagag
tcccagcagaaggttggaggatgttttgggaacttaatgtctcaaatgaaaagcctttat
ctcgcgtactgtgccaatcacccctgggctgtgcatgtcctcacagagtacagtgaggag
ttgggagaatttatggaaatgaaaggagcaaccagccctgggattcttatgctaaccacc
agcctcagcaaaccattcatgaggctggacaaatacccaacgttgcttaaagagctggag
cgccatatggaggaatatcacccagactggcctgacattcagaggtccatgactgctttc
aaaaatctctcatcccagtgtcaggaagtgcggaagaagaaggagctggaactgcagatc
ttgacagaaacagttcatggttgggaaggtgaagatattaaatctctgggaaatgttatc
tacatgtcgcaggtcactgtgcagtgtggaaatgaggagaagtgcgagaggtatttcctc
ttgttccctcatgtcctgcttatgctatctgccagtcccaggatgagtgcttttatttat
cagggaaagttgccattaacaggattgattgtcaccaggctagatgatagcgatactgac
aagaacacctttgaaattactggaagtatgattgaacggattttggtgacttgttccact
catcaggatttgcaggaatgggtggagcatcttcagaaacaaacgaaaacacccagtgtg
ggaattcctgtggtcagacagcagtctgtcccatgccatacacttccactacatcctgtg
acacccatcaataagcattctgatggctatccaatatctgtgactccttcatatcatacc
cttccacacccttccttacatgggacatcacacagctcgctgacctggggacccctagaa
ccacccaaaatgccaaaaccttggagtctgagctgccttcgcccagcagccccgctgaaa
ccatcagctgctctgtgttataaggaggacctcagcaagagtcctaaaaccatgaagaaa
ctgcttcccaagcggaaaccagaaaggaaagcatctgatgaagaatttgcattaaggaaa
agcacagcagctcttgaagaggacacacagatcttaaaagttattgaagcgtactgcact
agtgccaaaactcgccaaactctgaactcaacatatcgtaaagaatctgctccccaggtt
ctgttaccagaagaagagaaaataattgttgaagaaaccaacagcaatggacaaacgatc
atcgaagagaagagcctcgtggacactgtttatgcattgaaggatgaggtgctggagcta
aagcaggaaaataagaagatgagacgttccctggacgaggagcagcgagctcgtaaggag
ttagagaaactggtcagaaaagttctgaagaatatgaatgatttctcttgggatgaaacc
aatttatag
DBGET
integrated database retrieval system
