Rhincodon typus (whale shark): 109935831
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Entry
109935831 CDS
T06055
Name
(RefSeq) GPI mannosyltransferase 4-like
KO
K08098
GPI mannosyltransferase 4 [EC:2.4.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
109935831
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109935831
Glycosyltransferases [BR:
rtp01003
]
GPI-anchor biosynthesis
Core oligosaccharide
109935831
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
109935831
NCBI-ProteinID:
XP_048460062
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Position
13:23800364..23818804
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AA seq
587 aa
AA seq
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MVLTIVWLALALFRILWCLAPQTGYIHPDEFFQSPEVMAGDILNLKIFRTWEFNTSHPSR
SILFPMATAGFSFIVLKTLHNSGLFGSILSSNNLLIFPRFYLTCLSFILDYSVYHLACLW
GADPWHSLTLLSGSHVMLVFYTRTFSNVVEGVLFALLLVLVAVDLQQTNVAAHPRKKERR
NNKDLIGVVLVSGFFNRPTFIGYALVPMLLWLSHDEKGKFLFSLRTILKTSFSIFLSVIV
TTFIFIVIDTLYFDLLVSEIGWFLEDGNSTHKHIINLSKHLVLTPLNFILYNLDPENLAV
HGRHLWFTHLTVNGLTMFGALHLSAVVSVIRIITQKSVGPAWSHDPKKQQFKKRLLMQFS
ATSPITEYLILVYFVPLIILSLFSHQEARFLSPLIVPVVIHSVLNDDMFRRKGVIVVFNI
LFSILFGCLHQGGLIPCLSYLENILHSNDSMANQFEHDLIFYHTYMPPRYLLNIKSDQES
IRIIDLGGSDLSILNSTVNGLLNNFSKHLTMCLSKQIGNNQEINIYIIAPGTVQNEIRSC
GFQWKTVASFFPHLTTEDPPDISSLLSDDGLTQLSLYIFKVHTKSKI
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcacgatagtatggttggctctcgcattgttcaggatactatggtgcctggct
ccgcaaactggctatatacatcctgatgaattttttcagtcacctgaagttatggcaggt
gacattttgaatttgaagatctttcgtacttgggaattcaacaccagccaccccagcaga
tcaatcctgttcccaatggccacagctggcttttccttcatagttctgaaaactttacac
aattctggcttatttggcagtattctaagcagcaacaatttgttgatttttcctagattc
tacctgacatgcctgtcctttatactggactactctgtataccatttagcctgtctctgg
ggagcagacccttggcattctttaacactgctgagtgggtcacatgtgatgttggttttt
tacacaaggacattttcaaatgttgtggaaggagttctgtttgcattattgctggtgtta
gtagctgtggacctacagcaaacaaatgtggcagcacaccctaggaaaaaggaaagaagg
aacaataaagatcttattggggttgttttggtctctggcttttttaataggcccacattc
attggttacgctttagtaccaatgctgttgtggctttctcatgatgagaaagggaagttt
ctattcagcttaagaacaatactgaaaacatcatttagcatttttttatccgtaattgta
actactttcattttcattgttattgatacactatattttgatttgttagtctctgaaatt
ggctggtttttggaagatggaaattctacacacaaacatatcattaatctaagcaaacat
ctagttttaactccactcaatttcattttgtataacttggatccagaaaaccttgctgta
catgggcggcacctctggtttacgcacctgactgttaatggtcttacaatgttcggtgct
cttcacttgtcagctgttgtatctgttatcagaattattactcaaaagtctgttggccca
gcttggtcccatgacccaaagaaacagcagtttaaaaagagattactaatgcagttttct
gctacatctccaattactgagtatttaattttagtttattttgttcctctgatcatcctg
tctttgtttagtcatcaggaggcacggtttcttagtccactcattgtaccagttgttata
cacagtgttttaaatgatgacatgttcaggagaaaaggtgtaattgttgtgtttaacatt
ttattttcaatacttttcggctgccttcaccagggtggcttaataccttgtttgtcttat
ttagaaaatattttgcattcaaatgattccatggctaaccagtttgagcacgatttgata
ttttatcacacctatatgcctcctaggtatctcttgaatatcaaatcagatcaagagtct
atcagaatcattgacctgggagggtctgacttgtctatactcaatagcacagtgaatgga
ctgcttaataatttctcaaagcacttaacaatgtgtttgtccaagcagattgggaataat
caggaaataaatatctacattattgcacctggcactgttcaaaatgagatcagaagctgt
ggttttcagtggaaaactgttgcatcgtttttccctcatttaactacggaagatccacct
gatatttcttctcttctttctgacgatggattgacccaactgagtctttacattttcaag
gtgcacacaaagtcaaagatttag
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