Rhincodon typus (whale shark): 109935870
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Entry
109935870 CDS
T06055
Name
(RefSeq) polycomb group protein ASXL1-like isoform X1
KO
K11471
additional sex combs-like protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
109935870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109935870
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
109935870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
NAD_binding_2
Motif
Other DBs
NCBI-GeneID:
109935870
NCBI-ProteinID:
XP_048464089
LinkDB
All DBs
Position
19:23546096..23636723
Genome browser
AA seq
1706 aa
AA seq
DB search
MTPKQILHVIETEGLKEMRSGTSPLACLNAMLHTNSRADDGMFYRLPGRMGLYTLKKDAL
LWSKNVPIGDVEGYDDGPDLESCDSNETSTTGEENDASPVSDESSSNASCSTDNQGKQVS
PGKQNSHKATQQPVKQQPKKKIGVPVMMSKSIPRVVLTPLKVNGEHVESASAFAAKHTDG
ESSSASSGSSCTVTSGSTQYNRTEMNKLQCRSSLNRKPGQHFRALRRPNTAGQMKRNRGE
EIDVETPGSILVNTNLRALINSRTFTSLPLHFQQQLLFLLPEVDRQVGTDGIMRLSSSAL
NNEFFTSAAQGWKERLAEGEFTPEMQLRLRQEMEKEKRVELWKENFFEDYYGQKLGLTKE
ESEQQTSVQVGIENEASSPVLAGPSKQQSPVKKQDERLRKCTRSSKVDLKCRVKRSLIKE
AKAELTEPSEKTDSCTVSFQDTRGQKQHNHEAKVFHTVGCADEDQLSLSNNEARPGQLEE
NLPNKSVLNSKPILLTERPAGIQSQEHSKSDGCSELTDVQPAGISKDQITCLTIRSAVLK
SELEHNSSESKDQKRKSSEHSASTSGPEKKPRLEDHQSFRTAIDSFRTEKEHPTKEEPKV
PPIRIQLSRIKPPWVVKGQPTYQICPRIITTVGTVSRERTGARTLADIKARAQQARAQRE
AAAAAAASVTVEGGGRGSGSNGPRGIDSLGQIDGKAKALEQTTTKHQYRAQLFQTCSTDE
PGKSSDGENSVKQGVIIEECVESDLIDTTPSKLETDDIQQTELGGDTNYTVINSKSPDLV
VDVQDCNQATVSQLSDIVVSDGQTDSDETEILQEGQPPETLDLSADRDNICIESSEKLKC
EAVILSFPETDNPVHLPCDQTQKSVKDKTSCIEESLQNCGFSRPIIAETKNTVVLNAMGI
PLVGVKTAESDSLPSNEMETKVNTTDVLSTQLSGEFPETDLCEQEVNRCTIKEIESPLIH
KVTCSPILQSQDENDSDCVEVNVNNQHEINTLLEASNISHIAEKQMTSVIVSTCSNKDPS
HSLTQKLSLKSEGHDCFVSDDTECATEQLVKHEQTIANGRHQSIESDVAALEDVFGQLVS
KRQQNSGSDLNKSGLYYKTEKGSHLSDESCIQPTNQRILKDDRTPVGSKSGVIVESPDAC
KGTDNGDLPKQLQMVEDDQPQKDERPNECQNNKAEDLHNMHQTVSLLHPSVEEPKKIGNF
NRPLSSVEVNNPLVTQLLQGSLPLEKVLPQSHSGTKLEITRLLIPPPLLSENPQVKQERN
FSQSTVDDVPQTTDIKSIISGVHSGIKLSDCHLHKILSGDFRDLSQKRIEQMKSTVLQSS
KQYVQSQMVLDRDSRSLGDGPVVQEQQNRTPDLSKPVQESEATTEKVTRATCSFEDGSKE
LMKVSPGNIHNPNVKNPIIRNMPETLKQISNSTVSGYYIPNTPTFCKSLEAQNTIFGSVI
AKACSGIPGRQKVSHGYLHNTVVVQNDGSCRATEVIKIQSKGSVIEHVPGIAQTSPERNL
IGMENMPNARREWLPKLHESFKVIKTENIPTCRGNNQNQDIIGINDGAYIPFDSKDKLYV
GPIKMDCNIGKVIKETGLQFQHSSEHSLINSQLSIQQQLYGKLPKLSFSSTGFSHITNTS
VSELSMSNFPASLAGSVMSLSQKANFGNHNSSVPAQTFAESSGVNEMTFKCSCRLKAMIM
CKGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgacccccaaacagattctgcacgttatagagactgaaggactcaaagaaatgagaagt
ggaacttctcccttggcatgtctgaatgctatgcttcacactaattctcgtgcagatgat
ggaatgttttacagacttccagggcggatgggtctttatacattgaagaaagatgcattg
ttatggtccaaaaacgtgcccattggtgatgttgaaggttatgatgatggacctgacttg
gaaagctgtgactctaatgaaaccagtaccacgggtgaggaaaatgatgcatcaccggtg
tctgatgagagttcctcaaatgcatcatgttccactgataatcaaggcaaacaagtgtcc
cctggcaaacagaacagccacaaagcaactcagcagcctgtaaagcaacagccaaaaaag
aagattggagttccggtgatgatgagcaaatctattccaagagttgtgttgacaccactg
aaagtaaatggagaacatgtggaatcagcttcagcatttgcagcaaagcacacagatggt
gagtcaagcagtgcatctagtggtagttcctgcacagtgacttcagggagcacacaatac
aacagaacagaaatgaataaacttcagtgcaggtctagcctgaaccggaaacctggacag
cattttagagccctgagaaggccaaacacggcaggacagatgaagcggaacagaggggaa
gagattgatgttgaaacacctggatcaattcttgtcaatacgaatctacgtgctttgatc
aactcacggacttttacttctttgccactacattttcagcaacagctgctatttctactg
ccggaggtggacaggcaggttggtactgacggtataatgcggctcagcagttcagcccta
aataatgagtttttcacctctgcagctcagggatggaaggagcgattagcagaaggggaa
tttacacctgaaatgcaacttcggctccgtcaagaaatggaaaaagaaaagagagtggaa
ctgtggaaagagaatttctttgaagattattatgggcagaaactgggcttgactaaagaa
gaatcagaacagcagacatcagtacaagtgggaatagaaaatgaagccagttcacctgta
ttagcaggaccatctaaacagcaaagtccggttaaaaagcaggatgagagattaaggaaa
tgtactagaagttcaaaggtggacctcaaatgtagagtgaagaggagccttattaaagaa
gcaaaggctgaacttactgaaccaagtgaaaaaacagattcatgtacggtgtcttttcaa
gataccagaggccagaaacagcacaatcatgaggccaaggtgtttcacactgttggctgt
gcagatgaagatcaacttagtttaagtaataatgaagctagaccgggacagctagaagaa
aatcttccaaataaatctgtcttaaactcgaaacctatattacttacagaaagacctgca
ggaatacaatctcaagaacatagcaaatctgatggatgttcagagttgactgatgtgcaa
cctgctggaatttctaaggatcagatcacctgtcttactataaggagtgctgttttgaaa
agtgagttagagcacaattcgtcagagtccaaagaccaaaagagaaagtcttctgagcac
agtgcctcaacctctggccctgagaaaaaaccacgtcttgaagatcatcagtcctttcgg
accgcaattgatagctttcggacagaaaaagagcatcctacaaaagaagaaccaaaggtg
ccaccaattaggattcaactctcaagaatcaaaccaccatgggttgtcaaagggcagcca
acctatcagatatgccccagaatcatcactacagttggaacagtcagtcgagaaaggaca
ggtgccagaacacttgcagatatcaaagcccgtgctcagcaagccagggcacaaagggag
gcagcagcagctgcagctgccagtgttacagtggaaggagggggaaggggtagtggtagt
aatggaccacggggcattgattccctcggacagatcgacggaaaagcaaaagcccttgaa
caaactacaacaaaacatcagtatagagcacagctattccaaacctgctcaacagatgag
ccaggaaaaagcagtgatggagagaatagtgttaagcaaggtgttataattgaggagtgt
gtggaaagtgatctaattgacacaacaccaagtaaattggagacagatgatatccagcaa
actgaattgggaggtgataccaattacacagtaattaacagtaaatcaccagatttagtg
gtcgatgtgcaagattgcaaccaagcgactgtttctcaactgagtgacatagtggtttct
gatgggcaaacagacagtgatgaaactgaaattcttcaagagggtcaaccacccgaaaca
ctggacttgtctgctgaccgagacaatatttgtatagagtcgagtgaaaagcttaaatgt
gaagcagtaatcctttcatttcctgaaaccgataatcctgtgcatctaccctgtgatcaa
acccagaagtctgtaaaagataaaacaagttgcattgaagaatctcttcaaaactgtggt
ttctctagaccaataattgctgaaactaagaatactgtcgttctcaacgctatgggcatc
cctcttgtgggggtgaaaactgcagaatctgattcattgccaagtaatgaaatggaaaca
aaagtaaacactacagatgttttgtccacccaactatcaggtgaatttccagaaactgac
ttatgtgagcaagaggttaatagatgcaccataaaagaaattgaatctccattaatccat
aaagtaacttgttctccaattttgcagtcacaagacgaaaatgacagtgattgtgttgaa
gtaaatgtaaataatcagcatgaaataaacacattgctggaagcttcaaatatatcacat
atcgcagagaaacaaatgacatctgtaatagtgtcaacatgctctaataaagatcccagc
cattcattaacacagaaactttctctcaagtcggaggggcatgactgttttgtttctgat
gacacagaatgtgcaacggagcagcttgtgaaacatgagcagacaatagcaaatggcagg
caccagtcaatagaatcagatgttgcagcattagaggatgtctttggccagctagtgagc
aaaaggcagcaaaattctgggagtgacctgaataagagtggcttgtattataagactgaa
aaaggtagccacctgtctgacgaaagttgtatacagcccacaaatcaaagaatactgaaa
gatgacagaacccctgttggttctaaaagtggtgtaattgtggaaagtcctgatgcctgc
aaagggactgataatggtgatctgcccaaacagttacagatggtagaggatgatcagccg
caaaaggatgaaagaccaaatgagtgtcagaacaacaaggctgaagatttgcataacatg
catcagactgtctctctgctacatccaagtgttgaagagccgaaaaaaattggtaatttc
aataggccactgtcatccgttgaagtcaataaccccttggtcacccagttacttcagggc
agccttcctttagagaaggttttgccacagtctcattctggtactaaattggagataact
aggttgcttattccacctccgttgctttctgagaacccacaagttaagcaggaaagaaat
ttcagtcagtcaactgttgatgatgttccacaaacaactgatatcaaaagtataatcagt
ggagtacatagtggaatcaagttatctgactgtcatttgcataaaatattgtcaggagat
tttcgagatctgtctcaaaaacgaattgaacagatgaagtcaactgtactgcagtccagt
aagcaatatgtgcaatcacagatggtcttggacagagattctaggagtcttggagatggt
ccagttgtacaggagcagcaaaatagaacaccagatctttctaaacctgttcaagagtct
gaagcaacaacagaaaaagtaactcgagctacttgcagttttgaagatggcagcaaagag
ctaatgaaagtctcccctggaaacatacacaatcccaatgtgaaaaatcctataattaga
aacatgcctgagacgttgaagcaaatcagtaactctactgtgtctggctattacattcca
aatacaccaaccttttgtaaaagtctggaggctcagaacacaatatttggttcagtaata
gctaaagcttgcagtggaataccagggaggcaaaaggttagtcatggttatttgcataac
acagttgttgtgcaaaatgatggaagctgtagagcaacagaagtaattaagattcagtca
aagggttctgttattgagcatgtgccaggcattgcccagacttcaccagaaaggaattta
attggaatggagaatatgccaaatgcaagaagggaatggcttcctaaactgcatgaaagc
tttaaagtcatcaaaactgaaaatatacccacatgtagaggaaataaccaaaaccaagac
atcattggtataaatgatggtgcatacattccgtttgattccaaagacaaattgtatgtt
ggaccaataaagatggactgcaatattggaaaggttattaaagagactggtctacaattt
cagcattcgtcagaacattctctgattaattcccagctcagtattcaacagcagttatac
ggcaagcttcctaaactttccttcagtagcacaggatttagtcatatcaccaacacatct
gtttcagaactctctatgagtaactttccagcatctcttgctggaagcgtaatgtcactg
agtcaaaaggcaaactttgggaatcataattcttcggttcctgctcagacatttgctgaa
agcagtggtgtcaacgaaatgacttttaaatgttcttgcagattaaaggccatgatcatg
tgcaaaggatgtggagcattttgccatgatgattgtataggcccatctaagctttgtgta
tcatgtcttgtggtgagatag
DBGET
integrated database retrieval system
