Rhincodon typus (whale shark): 109935907
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Entry
109935907 CDS
T06055
Symbol
stub1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP isoform X2
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
rtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109935907 (stub1)
04120 Ubiquitin mediated proteolysis
109935907 (stub1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rtp03110
]
109935907 (stub1)
04131 Membrane trafficking [BR:
rtp04131
]
109935907 (stub1)
04121 Ubiquitin system [BR:
rtp04121
]
109935907 (stub1)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109935907 (stub1)
Chaperones and folding catalysts [BR:
rtp03110
]
Other chaperones and cochaperones
Others
109935907 (stub1)
Membrane trafficking [BR:
rtp04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109935907 (stub1)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
U-box type E3
109935907 (stub1)
Multi subunit type E3
STUB1-CHIC2 complex
109935907 (stub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
CHIP_TPR_N
TPR_1
TPR_2
ANAPC3
TPR_8
TPR_11
TPR_17
TPR_19
TPR_12
TPR_16
ARM_TT21_C
TPR_7
TPR_14
TPR_9
TPR_CcmH_CycH
SHNi-TPR
ARM_TT21
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
109935907
NCBI-ProteinID:
XP_020390122
LinkDB
All DBs
Position
21:7138336..7184831
Genome browser
AA seq
289 aa
AA seq
DB search
MSGSPEKSLTAQELKEQGNRLFLSRKYQEAAASYSKAINRNPSVAVYYTNRALCYVKMQQ
FDKAVADCKHALELDSQSVKAHFFLGQCQLEMENYDEAIGNLQRAYNLAKEQRLNFGDDI
PSALRMAKKKRWNSIEDKRIQQENDLHDYLTKLILSEKEREVEQCKRKHYEENLDDSRTR
MEIAKIEARHDKYMNEMDDLFSQVDEKRKKRDIPDYLCGKISFELMREPCITPSGITYDR
KDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGWVEEY
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaagccccgagaagagcctgactgctcaggagctgaaggagcaaggaaaccgc
ctgttcctcagcagaaagtatcaggaagccgcggcctcctacagcaaggccattaaccgt
aacccatctgtggctgtgtactacacaaatcgtgccctgtgttacgtgaagatgcagcag
tttgataaggcagtggcagattgtaaacatgctctggagttggacagccagtctgttaaa
gcccacttcttcctgggacaatgccaactggaaatggagaactatgatgaagctattggc
aacctgcagagagcttataatttagcaaaagaacaaaggctgaattttggggatgatata
ccaagtgccctaaggatggcaaagaagaagcgttggaacagcattgaagataaaagaatt
cagcaggaaaatgacctccatgactacctcaccaaactgatcctctcagaaaaggaaagg
gaagtggaacaatgtaaacggaaacactatgaagagaacctggatgattcccgaacccga
atggaaattgcaaagatagaagccagacatgacaagtacatgaatgaaatggatgattta
ttctcccaggtggatgaaaagagaaagaaacgggatattcctgactacctatgtggaaaa
atcagtttcgagttgatgagggagccatgcatcacgccaagtgggatcacatatgacagg
aaagacatagaggaacaccttcagcgggtggggcactttgatcctgtaacgcgaagccct
ttgacccaagagcagttgattccaaatctggctatgaaggaggtaattgatgcatttata
tcagaaaatggctgggtggaagaatactga
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integrated database retrieval system
