Rhincodon typus (whale shark): 109935967
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Entry
109935967 CDS
T06055
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109935967 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109935967 (nup107)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109935967 (nup107)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109935967 (nup107)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109935967 (nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
109935967
NCBI-ProteinID:
XP_048463834
LinkDB
All DBs
Position
18:35102788..35153611
Genome browser
AA seq
931 aa
AA seq
DB search
MSQVWQESLERRTTGDFPSPEVRNSETSRTSLRRGATGKGFDILKHTKGVSSLHLPSATR
ATAHIFQDFYTPQTRICPLKQSDVSSILGSIKPSLLVPTIPETYLQYIPEDAEDTASSIF
TQQRTSMKATAESMRSFSEDLTLSAVMLREDDPGLTASASLFPKFLESFLAHSSTAIFDL
IALYEAECREQVNILKKIVNRATPGQQKFSKTASVLWFLQQEMVTWRLIGSLYRDRIESS
VEEGMMFEVAAPNATEKTIVEMLFQRDSLIRQCQIVVDWLESIAKDEAGNFAENIEFYAK
SVYWENTLHVLTQQRSGVAGFSRQLVTELDPDAPIRQKMPLADLDREDDARFMKYLFALI
RAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDPNLNGGTVLEPVEGNPNRSVWKACCWRM
AEDEQFNRYERAIYAALSGNLKQLLSVCDTWEDCVWAYFRVMVDSLVEQEIRALSTPVSE
LEELPKEYTEANWTLEAIFEELQATDKKQVLEENKAHYHIIQKFIILGDIDGLMDEFQDW
LEKCRSLLPAHLLRFMTHLVLFLWSLGLQTKEDVCTDILKTYIELLIQAKHTYLIAFYVS
HLPPELAVTQYSAFLETVTETEQRKLCLDLAREAGLDVAAVTKCVVENIRKKDADEFTHH
DLSPSLDTATTEEDRMKINVIEWLVFDPTQRAETLKQSNAIMRKFLASKKHEAAKEVFSK
IPRDSVTEVCTSWEDYGMNFMPPAEEENAIREHLCIRAYLEAHEMFNNWFKWMQLAPQEP
TISASASFTETVAHEHKQKKFQSDYESWSDELQSLTKDVKEKICNVLLFVNGGWLIDIRE
DAEEDAERSHQLNLLRQLCLPMMCFLLHTVLHSTKQYQQCLKLADIVASEQHKLYQVFSK
EELAKFLHLLRESSLMLLDQNLDPLGYELQS
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagtatggcaggaatcattggagagacgaacaactggagacttcccatctcct
gaagtccggaattctgagactagtagaacttctctgaggcgcggtgctacaggaaaaggt
tttgacatactgaagcacactaaaggcgtttccagcttacatctgccatcagctactcga
gctacagctcatatattccaagacttctatacaccacagactcgaatctgtcctctaaaa
caatcggatgtgtcatcaattttaggatcaatcaaaccatctctacttgtacctacaata
ccagaaacatatttgcaatatatcccagaagatgcagaggacactgcttcatctattttc
actcagcagaggactagcatgaaagccacagctgaatcaatgagaagtttttcagaagac
ttgactcttagtgcagtcatgttaagggaggatgatccaggattaactgcttcagccagt
ttgttcccaaagtttttggaatctttcttagcacattcatctactgctatctttgatttg
atcgcactttatgaagccgaatgcagggagcaggtaaatatacttaagaagattgtaaac
cgtgcaactcctgggcaacagaaattttcaaaaacagctagtgttctctggttccttcag
caagaaatggtcacctggcgtttaattggatctctttacagggacagaattgaatccagt
gtggaagaaggcatgatgtttgaagtagctgctccaaatgccactgaaaagaccattgta
gaaatgcttttccaacgcgattcactgatacgacagtgtcagatcgttgtagattggtta
gagagtattgccaaagatgaagctggaaattttgcagaaaacattgaattttatgcaaaa
tctgtgtactgggaaaatacactacatgtgttaacacagcagcgatcgggcgttgctgga
ttttcaaggcaacttgtgactgagctggatccagatgctcctatcagacagaaaatgcct
cttgccgatttggatagggaagatgatgctagatttatgaaatatctctttgctcttata
cgagctgggatgactgatgaggctcagagattgtgcaaacgttgtggtcaggcttggaga
gctgcaactctggaaggctggaaattgtatcatgatccaaatcttaatggtggaacagtt
cttgaacctgtggaagggaacccaaacagaagtgtttggaaggcttgttgctggaggatg
gctgaagatgagcagtttaacagatatgaacgagcaatctatgcagccttaagtggaaat
cttaaacagctcctttcagtgtgtgatacttgggaagactgtgtttgggcatacttcagg
gtcatggtggatagtcttgtagaacaagaaatccgtgcattgagtactcctgtgagtgaa
ttagaagaattgcctaaagagtatactgaagcaaattggactttagaggcaatatttgaa
gagctgcaggcaacagacaaaaaacaagtgttggaggagaataaagctcattaccatata
atccagaaattcataatcttgggagacattgatggtttaatggatgaatttcaggattgg
ctagaaaaatgcagatctctccttccagcacacctccttcgattcatgactcaccttgtg
ttgtttttgtggagtttgggcctacagacaaaggaggatgtttgtacagacattttaaaa
acttatatagagcttctaatccaagctaagcacacatatttaatagcattttatgtaagc
catttgcctccggagctggctgtcactcaatattccgcatttttggaaactgtcacagag
actgagcaacggaaactatgtctagatctggcgagagaagccggccttgatgtggcagct
gtgaccaagtgtgttgtggaaaacatccggaaaaaggatgctgacgagtttactcatcat
gatctatctccatctctggatactgcgactacagaagaagaccgtatgaagatcaatgta
attgagtggttggtctttgatcctacacaaagagcagagacactgaaacagagcaatgcc
ataatgagaaaattcttggcttcaaaaaaacatgaagctgcaaaagaagtgttcagcaaa
attccacgtgattctgtaactgaagtgtgcacgagctgggaagattatggaatgaatttc
atgcctccagcagaggaggaaaatgctatccgggaacatttgtgcataagggcttatctg
gaagctcatgagatgttcaacaactggtttaaatggatgcagttagcacctcaggaaccc
accatttccgcaagcgcaagtttcacagagacagtggctcatgaacacaaacagaagaaa
ttccagagtgattatgagagctggagtgatgaattgcaaagtctcaccaaagatgtaaaa
gagaagatctgtaatgtcttgctttttgtgaatggaggatggttgattgacatcagagag
gacgctgaagaagatgctgagcgcagtcaccagttgaatttattacgccagctctgtcta
cccatgatgtgcttcttgcttcacacagtactacacagcactaaacagtaccagcagtgc
ttaaaactggcggatatcgttgcatcagagcaacataagctttatcaagtattttcaaaa
gaggaacttgcaaaattcttgcatttgctgagagagtcatcgctcatgttattggatcag
aatcttgatcccttgggatatgaattacaatcttag
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