Rhincodon typus (whale shark): 109936010
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Entry
109936010 CDS
T06055
Name
(RefSeq) syntaxin-1A-like
KO
K08486
syntaxin 1B/2/3
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109936010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109936010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109936010
Membrane trafficking [BR:
rtp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
109936010
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
109936010
Exosomal proteins of other body fluids (saliva and urine)
109936010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Motif
Other DBs
NCBI-GeneID:
109936010
NCBI-ProteinID:
XP_020390213
LinkDB
All DBs
Position
14:complement(60810380..60811499)
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AA seq
293 aa
AA seq
DB search
MKDRLDELMKAAEGENVNKVLGGIDNTLFEGAGLGKFDSFFSEVSVISSKLNKLEKLVYG
IQRKQTKVLCGTESDSISKEKQSLVDAKRNFTHEAKNLQSQLDMMHFEFSQKMDTAQLSV
EYRIRQCQFNALAARYRDILSFHYAKEIEYVCRLKQQIVRQTQLAGLQLQDENIDRLMEN
TSALQIVGRDLEILKAKQHLALAQQRQKQLLLLESQITEVHELFLQFEVLVTEQQEIVNS
IEYNVMRTVDYTIQSRDNVKTAIKYQKKSRVTAAAAVVLSLCACAPCIAKLTS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacaggctggatgagctaatgaaagctgcagagggcgagaatgtgaacaaagtg
cttggtggaattgataacacactgtttgaaggagcgggactcggcaaatttgactcattt
tttagcgaggtttcagtcatttcctcaaagctcaacaagctggaaaagctggtttacggc
atccagaggaagcaaacaaaagtgctttgtgggactgaaagtgacagcatatccaaggaa
aagcaaagcctagtggatgcaaagcgtaattttacccacgaggccaagaacctgcagtca
cagctagacatgatgcatttcgaattttctcagaaaatggacactgcgcagctgtcagta
gagtacaggatccgccaatgccagtttaatgcactggcagcccgttatcgggacatccta
tcttttcactacgcgaaagaaatcgagtatgtctgtaggttgaaacagcaaatcgttcga
cagactcagctagcgggcttgcagctccaggatgagaatattgaccgtttgatggagaac
acttcagccctgcaaattgttggccgagatctggagatcctcaaagccaaacagcatctg
gctcttgcccagcagcgccagaagcaactgttgctcctcgaatctcagatcactgaagtt
catgaactcttcctccagtttgaggtactggtaactgagcagcaagagatagtgaacagc
attgagtacaatgtaatgcgaacagtcgattataccattcagtcaagagataatgtcaaa
actgcaataaaatatcagaaaaaatctcgagttactgcagctgcagcagtggtattgagc
ctgtgtgcctgtgcaccatgcattgcgaagttgacatcttaa
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integrated database retrieval system
