Rhincodon typus (whale shark): 109936026
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Entry
109936026 CDS
T06055
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109936026
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Others
Ferlins
109936026
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
FerA
FerI
PI3K_C2
Pex24p
Ferlin_C
Motif
Other DBs
NCBI-GeneID:
109936026
NCBI-ProteinID:
XP_048465127
LinkDB
All DBs
Position
20:14959574..15153805
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AA seq
1986 aa
AA seq
DB search
MLRIIVESASNLPDSKFGTPDPIASVTFKGEKKKTKSIDNELNPVWNEKIEFDLKGQTLN
ASSSILVVVKDYETIGKDKFIGSATISLKDLASGQKTLPFKNVALLTEKKQPTGGTINLM
ATYEPPAGAVPPDPSNLGSSGDQDAEGNEDEDAEDEAGDGGGTPGAPSTPRQAAAHVSKR
LRKKKSKRLLSNKPQDFQIRVRIISARQLPGNNIKPVVKVTVCNQTHRTRIRRGNNPYFD
EIFFYNVTQSPEELFDSSILIRVYNSFSLRSDSLMGEFKLDIGYVYDEPGHAILRKWLLL
HDPEDPSTGSKGYMKVSLFVLATGDEPPVEKKGVNEENDDVESNLLLPAGLSLRWVTFLL
KVYRAEDIPQMDDAFAETMKSIFGAGSDKKNLVDPYVEVGFAGKKLCTKIIEKNANPEWN
QAINLQVKFPSMCERLSLTLFDWDRMTRNDAIGTAFLYLSRIASSGGEVEDPPRSSHTVK
SKPGDTGDEEVGFLPAFGPCYVNFYGSPREYTGFADPYEDLNYGKGEGVAYRGRILVELI
TKLEGNPEKKLEDIPSDDVLVVQKYQRRRKYSLAAVFYAGTMLRDVGDAVQFEVSIGNYG
NKFDKTCRPLASTTQYSRAVFDGNYYYFLPWANTKPVVTLTSYWEDISHRLDALNIIIKI
VSRMEKNLTVLKTAIQAKVGEERLAELWLKVIEQIIEDCSQPLPKLEGKSNVTQLDLKIL
KLRKSTLEGILDSAKRTRMEAEDPKESIDDIEDWLERLKSLAEEPQNSMPDVIVWMICDE
KRVAYARIPAHEVLYSTTSEEACGQYSGKTQTIFLKYLEGGNKSFKIPIQLRVRFWLGLS
TVESKFNSFSEGTFSVFSELYENQAQLLGKWGTSGLVGRQKFSDVTGKIKLKKESFMPPR
GWEWEGNWIVDPEKSLLTEADAGHTEFIDEVYENNSRYPGAEWKVAEEPYTDLNGEKSSS
KEEIECPPGWNWLDDWEYDVNRAVDEHGWEYGITVPPDDKPKSWVSTEKMYHTHRRRRWV
RRRKKDDQQTVQPVKSQTPGQDLEGWEYASLIGWNFHLKQRKSDTYRRRRWRRKMAPSER
LGAAAVFKLEGALALTSGEDGDKSPTADSIFGASAPTISCVFDRPAIYHLRCYIYQARAI
ISMDKDSFSDPYAHVSFLHQSKTTEVIKSTLNPTWDQTLIFNDIDIYGSPETLIKNPPNV
VIEIYDEDQVGKDEFLGRCTCPPMVKLNPETDMVPKLLWYPIKNGKKKSGELLVAAELIM
KDKPDGSNLPILPPVRSGVLYMVPHGIRPVVQLTAIEILTWGLRNMKSYQLAAVTSPSLI
VECGGEYLESAVIKSLKKCPNFPTSVLFMKVLLPKEEMYTPPIVIKVIDHRPFGRKPVVG
QCTVHSLQEYRIDPYAARQAVGMQSKASLLSNARDCVVDIEDNQKPLLESQIVSTDSEGL
AAFRSSQAAKEEEAIDWWSKFYASIGEHERCGTYIQKGYDTLKVYTTELENVPEFKGLTD
FCHTFKLYRGKSEEDEDPSVVGEFKGSFKIYPLSDDPNVQTPPRQFAELPDSGAQECLVR
IYVVRAIDLQPKDNNGKCDPYVKITLGKKSIEDRDNYIPKTLNPVFGRMFEITCNLPTEK
DLKVALYDFDLLTRDEKVGETVIDLENRLLSRFGAYSGLPQSYCVSGINMWRDQLKPTQL
LQNLAKMKGLSQPIISSNSLSYNGQEYLLNDIERNKTLNIHLGPPEERLALHVLRQQGLV
PEHTEIRSLYSTYQPNLTQGKLQMWVDIYPMSLGPPGPPFDINPRKPKKYFLRCVIWNTS
DVILDETSITGEEMSDIYVKGWMVGLEDEKQKTDVHYRSLGGEGNFNWRLVFPFDYLPAE
QLCVVSKKENFWSLDKTEFRMPPKLIIQIWDNDKFSMDDYLGVLELDLNSTICPTKTSSG
CSLKMLPDEKGGKAPNMTSLFAQKSMNGWWPCVQEKDGKRVLAVRTFKHFQTYLQFFLEI
VGLSFV
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaattatagtagaatccgccagtaatcttcctgactcaaaatttggaactccc
gacccaatagcgtcggtcactttcaaaggtgagaagaaaaaaaccaagtcaattgacaat
gaattgaaccctgtgtggaatgagaaaatagaatttgacttgaagggacagactctaaat
gcttcttcatcaattcttgttgtggttaaggactatgagacaatcggaaaagacaagttt
attggttctgcaacgatttccttgaaagaccttgcaagtggccaaaagacattacctttc
aaaaatgttgcattgctcactgaaaagaagcagccaactggggggacaataaatctcatg
gcaacttatgaaccacctgctggagctgtgccacctgacccatccaaccttggaagctct
ggtgatcaggatgctgaagggaatgaagatgaggatgcggaagatgaagcaggtgatggt
ggaggaacccctggagctcccagcacgccacgccaggcagcagcccatgttagcaaacga
ctccgaaagaagaaaagcaagagattactttcaaacaagcctcaggatttccagattcgg
gtgaggataatttcagctcgtcagctgcctggtaataacataaagccagttgtgaaagtg
actgtctgcaaccaaacccatcgaacgagaatccgaagaggaaacaatccctatttcgat
gagattttcttctacaatgtaactcaatcaccagaagaactctttgattcatcgatctta
attagggtctacaactctttttcactgcgatcagattccttaatgggagaattcaagttg
gacattggctatgtatatgatgaacctggacatgctattctaaggaaatggcttttgctt
catgatcctgaagacccaagtacaggatccaagggatacatgaaagtcagtttatttgtc
ttggcgacaggcgatgaacctccggttgaaaagaaaggagtaaatgaagagaatgacgat
gttgaaagcaacctgcttctccctgcaggtctctcactgcggtgggtgactttccttctg
aaggtctacagagcagaagacattccacagatggatgatgcctttgctgaaactatgaag
tcaatatttggagccgggtctgataagaaaaatcttgtggacccatacgtggaagttggc
tttgctgggaaaaagctctgtacaaagattatagagaaaaatgccaaccctgaatggaat
caagcaatcaaccttcaagtcaagtttccatctatgtgcgaaagactaagtttgactctg
tttgattgggatcggatgaccaggaatgatgctattggaacagcatttttgtacctctcc
aggatagcatcatctggaggagaagttgaagaccccccaagaagctcacatactgtgaag
agcaagccaggtgacacgggagatgaggaagtaggatttcttccagcttttgggccatgt
tatgtaaacttttatgggagccccagggaatacactggctttgctgatccttacgaggat
ttaaactatggaaagggtgagggagttgcatatcgtggtagaatattagttgaactaatc
accaaacttgaaggtaatccagagaagaagttggaggacattcccagtgatgatgtcttg
gtggttcagaaataccaacgccggcgtaaatatagccttgctgctgtcttttatgctgga
acaatgcttcgcgatgttggagatgccgtccagtttgaagttagcattggaaattacggc
aacaaatttgacaaaacatgtaggcctttagcttcaactactcagtacagtcgagcagtt
tttgatggtaactattattattttctaccttgggccaacacgaaacctgtggtgacactg
acctcctattgggaagatattagtcataggttggacgccttgaatatcatcataaaaatt
gtcagcagaatggaaaagaatttgacagtgctgaagactgctattcaggctaaagttggt
gaagaacgcctggctgagctgtggttgaaagttattgaacaaatcattgaggactgcagc
caacccctaccaaagttagaaggcaaatccaatgtgactcagcttgatctgaagatccta
aagctccgtaaaagcactctggaaggtatacttgactcggcaaaacgcacacgaatggag
gcagaggacccaaaggaatcaattgatgatattgaagactggctggagagactgaaatca
ttggctgaagagccacagaacagcatgccagatgtgattgtctggatgatctgtgatgag
aaacgagttgcatatgcacgaatcccagctcacgaggtgctttactcaacaaccagtgaa
gaagcctgtggccaatactctggaaagacacaaaccatattcttgaagtatctggaaggc
ggcaacaaaagtttcaaaattccaattcagctacgtgtccgattttggcttggcctctct
actgttgagagcaagttcaacagtttttctgaaggaacgttcagtgtattttctgaattg
tatgaaaaccaagcacaattactgggcaaatggggtaccagtgggcttgttggtcgccag
aagttttctgatgtaacagggaaaataaaactgaagaaagaaagcttcatgcccccaaga
ggttgggaatgggaaggcaactggattgttgatcctgaaaaaagtttgctaacagaagct
gatgctggtcacacagaatttattgatgaagtttatgaaaataactcccgctaccctgga
gctgagtggaaagttgcagaggagccttacactgatctgaatggtgaaaagagttcctca
aaagaggagattgagtgtccaccaggctggaattggttggatgattgggaatatgatgtc
aatcgagctgtggatgaacacggctgggagtatggaataacggtacccccggatgacaaa
cccaaatcttgggtctcgacagagaaaatgtaccacacccataggcgcaggcgctgggtg
agaaggcgcaagaaagacgatcagcaaacagtccaacccgtaaagagtcaaacacctggc
caggatttggaaggatgggaatacgcttctctgattggttggaactttcacctaaagcag
cggaaatcagatacttaccgacgcagaagatggagaagaaaaatggccccatctgaacga
cttggagctgctgcagtcttcaaactcgaaggtgcccttgctctgacttcgggtgaggat
ggtgacaaatcgccaactgcagactctatttttggggcaagtgctccgacgatctcctgt
gtgtttgaccgccctgcaatctatcacctccgttgctacatttatcaagcaagagccata
atttccatggacaaagatagtttttcagatccatatgctcatgtttcatttctccatcaa
agcaagacaactgaagttattaaatccacactgaacccaacctgggaccagaccctgatc
ttcaatgacattgatatctacggcagtcctgaaacattaattaaaaacccaccaaatgtg
gtgattgaaatatatgatgaagatcaagttgggaaagatgaatttttaggcagatgtacc
tgtcctccaatggtgaagctaaatccagaaacagacatggttcccaagctcctctggtat
ccaataaagaatgggaaaaagaaatctggagagctccttgttgctgctgagctaataatg
aaagacaaacctgatggttctaatttaccaattcttccaccagtccggtctggtgtacta
tacatggtgccacatgggattagaccagttgtgcagcttactgcaattgaaatactaacg
tggggcttgcggaacatgaagagctaccaactggctgctgttacatccccaagtctcatt
gtagaatgtggtggcgagtatttggagtcagcagtgatcaagagtcttaagaagtgtcct
aatttccccacttctgttctctttatgaaagtgctgcttccaaaagaagaaatgtacacc
cctcctattgtcataaaggtgattgaccacagaccctttgggcgtaagccagtggttggg
cagtgcacagttcattctctgcaagaatatcggattgatccatatgctgcaagacaggct
gtcggaatgcaatcaaaagcatctctgctttcaaatgctcgtgactgtgtcgttgacata
gaagacaatcaaaaacctctccttgaatcacagatcgtgtccactgattctgaaggactg
gctgcttttcgatcttcccaggctgcaaaggaggaagaggcaattgattggtggagcaag
ttttatgcatctataggagagcatgaacgatgtggcacctatattcagaaaggttatgat
acattgaaggtgtacaccacagaactggagaatgtcccagaattcaaaggcctgactgat
ttctgccacacctttaaactatacagaggtaaatccgaagaggatgaagacccatcagtt
gtgggtgaatttaagggttccttcaagatttacccactgagtgatgatccaaatgttcaa
acgcctccacgtcagtttgcagaactgccagatagtggagctcaggaatgtttggtgcga
atttatgttgttcgagccattgacttacaaccaaaagataataatggcaagtgtgatcca
tatgtgaagatcaccttgggtaaaaaatcaatagaagacagagacaactacattcccaag
accctgaacccagtctttggcaggatgtttgaaattacttgcaacttgcctacagagaaa
gatctcaaagtagcactttatgattttgatttgttgactcgtgatgaaaaggtgggagag
actgttattgacctggaaaaccgactcctatcgcgctttggagcttattctggattgcct
caatcatactgtgtttctggtataaatatgtggcgtgatcaactcaaaccaacccagttg
ttacagaatttagccaaaatgaaaggcctttctcagccaatcatctctagcaacagtctc
tcctacaatggtcaggaatatttactcaatgacattgaacgtaacaagactttaaatatc
catcttggacctccagaggaacggcttgcacttcatgttttgagacagcaaggacttgta
cccgagcacacagaaattaggtcgttgtacagcacctaccaacccaaccttacacaggga
aagcttcagatgtgggttgatatctatccaatgagtctaggtccccctggaccaccattc
gacatcaatccccgaaaacccaaaaaatatttcctccgctgtgtaatctggaataccagt
gatgttattctggatgaaacgagcattactggagaagagatgagtgatatctatgtgaag
ggctggatggtaggacttgaagatgagaagcagaagactgacgtacattacaggtcactc
ggaggtgaagggaatttcaattggagactggtattcccatttgactacctcccagctgag
cagctctgtgttgtatccaagaaggaaaatttctggagccttgacaaaacagaattcagg
atgcctcccaaattaatcattcaaatctgggacaatgataaattttccatggatgactat
ttgggtgtccttgagctagacctaaattcaacaatatgtccaaccaaaacctcttcggga
tgcagtttgaaaatgctaccagatgaaaagggaggaaaagcaccgaacatgacctccctt
tttgctcaaaaatcaatgaatggatggtggccgtgtgtccaagagaaagacggcaagcgc
gttttggctgtaaggaccttcaaacattttcaaacctatctccagttcttccttgaaatt
gtgggcctttcatttgtttga
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integrated database retrieval system
