Rhincodon typus (whale shark): 109936097
Help
Entry
109936097 CDS
T06055
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a isoform X1
KO
K19472
homeobox protein SIX2
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109936097 (six2a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
109936097 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
109936097
NCBI-ProteinID:
XP_020390335
LinkDB
All DBs
Position
9:65862655..65876124
Genome browser
AA seq
298 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVSFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERYEENSENSNSNVTAGGHNPMNHSMNGNKNMLASSDEEKTPSQTPDHTSSSPAL
LLGSLGQSSNTSLQPLHTLAAPPGPSAVAVPNSDVIHHHALQDSMLNPMSSNLVDLGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcttccaacttttgggtttactcaagagcaagtggcgtgtgtgtgcgaagtc
ctccagcaaggaggtaacatcgagcggctcggccgcttcctgtggtcactacctgcctgt
gaacatctgcataaaaacgagagcgtcctcaaagccaaggccgtggtatctttccaccga
ggcaacttccgcgaactttacaagattctggagagccaccagttctctccgcacaaccac
ccgaagctgcagcagttgtggctaaaggctcactacatcgaagccgaaaagctgcggggg
cggccgctaggggccgtgggcaagtaccgcgtccggcgcaagttcccgctgccgcgctct
atttgggacggcgaggaaaccagctactgcttcaaggagaagtcgcgcagcgtcctgcgg
gaatggtatgctcacaacccatacccttcgccccgggagaagagggagttggccgaagcc
accggcctcaccaccacccaggtcagcaactggttcaagaacaggcgtcagagggaccga
gccgccgaagccaaagaaaggtacgaagaaaacagcgagaactcgaattccaacgttacg
gccggcggccacaacccaatgaatcattcgatgaatgggaacaaaaatatgttagcgagc
tcagacgaggaaaagactccgtctcaaacccccgatcacacttcgagcagcccagcgcta
ctcttaggatccctgggccagagctccaacaccagcctgcagcctctacacactctggcc
gcgcctccgggtcctagcgccgttgcggtacctaactcagatgttatacaccatcatgca
ttacaggactccatgctcaaccccatgtcatccaatttagttgaccttggctcgtaa
DBGET
integrated database retrieval system
