Rhincodon typus (whale shark): 109936219
Help
Entry
109936219 CDS
T06055
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109936219 (vps50)
Membrane trafficking [BR:
rtp04131
]
Protein recycling
Others
EARP complex
109936219 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndetin_C
Vps54_N
Motif
Other DBs
NCBI-GeneID:
109936219
NCBI-ProteinID:
XP_048466875
LinkDB
All DBs
Position
2:69654822..69813302
Genome browser
AA seq
775 aa
AA seq
DB search
MLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVALSKTCKHFE
VSHYTKVQLAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNSDTKFQKLQY
KDLCTHITPDSYIPCLSDLCKALWEVMLSYYRTMSWHDERDNEESVPAADGRTEISTDDA
NFNRSYVKKKLEHGLSRIWQDVQLKAKTYLLGTDLSSFKYDDFIFVLDIISRLMQVGEEF
CGSKSEVLQESIRKQSVNYFKSYHRIRLEELRMFLENETWELCPVKSNFSILQLHEFKFM
RQSRSPSMSPSKQYTTTSATTGSLFDQYQNGGNPFEHQADIKDDETEDVLAANGYESDEL
EKSVYQDYDSDSDVPEELKRDYVDEQTGDIPVKSVSKETLKGRKKSDYYLNKGNTLILTN
TTLNVIRLVGKYMQMMNILKPIAFDVIHCMSQLFDYYLYAVYTFFGREDMYESTGLGLIS
SRLRTTLNRIQESLIDLEAPPETAGPLPATEERKEKVPSPHLSHLVVLNSNETLYGLAER
VVATESLVFLADQFECLQPHLDAMMPSAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAI
DYEQMLHLMANVKWDIKEIMSQHNVYIDTLLKEFEQFNKKLSEVSKRVRIPLQVSNVLWE
HCIRLANRTIVEGYANAKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKEFVETYIKA
YYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLIAAIDESDKPKR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttggaggaagaagattatcctggagcaatacaactctgtttggaatgtcaaaaagca
gctagcacattcaaacactacagctgtataagtgaactgaattcaaaattacaggataca
ttggaacaaatagaggaacaattagatgttgcactgtcaaaaacctgcaagcactttgaa
gtcagtcattataccaaggtacaacttgcttacagattgctgggaaaaacgcagactgca
atggaccagctacacatgcacttcactcaggcgatccataacacagtgttccaggttgtc
cttggatatgtggaattgtgtgccggaaattctgacaccaagtttcagaagcttcaatat
aaagatctttgcacgcatattactccggacagctacatcccatgcctatccgacctctgc
aaagctctgtgggaagtcatgctaagctactatcggaccatgtcgtggcatgatgaacgt
gacaatgaagagtctgtcccagctgctgatggccgtactgaaatttccacggatgatgcc
aactttaatcgaagttatgtgaaaaagaaattggaacatggcctttctcgtatctggcag
gatgttcaattaaaagcaaaaacatatttgcttggaacagatttatccagtttcaagtat
gacgattttatttttgtactggacattattagcagattgatgcaagttggtgaagaattt
tgtggcagtaaatcagaggtgctgcaggagtctattcgaaaacaaagtgtgaattatttt
aaaagctatcacagaatacgccttgaagagctacgaatgtttttagaaaatgaaacttgg
gaactatgtcctgtgaaatcaaacttcagtattttgcaattgcacgagtttaaatttatg
cggcagtcacgttccccttctatgtcacccagcaagcaatatacaacaacatcagcaaca
acgggatctctatttgaccagtatcaaaatggtggaaatccatttgaacaccaggcagac
atcaaagatgatgaaacagaagatgttcttgctgctaatgggtatgaatctgatgagttg
gagaaaagtgtttatcaagactacgatagtgacagtgatgtcccagaagagcttaaaaga
gactatgtggacgagcagactggtgacattcctgtgaaaagcgtctccaaagaaaccctg
aaaggtaggaagaagtcggactactatctgaacaagggcaatacactcattttaacaaac
actactctgaatgtaataaggcttgttggaaaatacatgcaaatgatgaatatcctgaag
ccaattgcttttgatgttatccactgtatgtcacaactatttgactattacttgtatgct
gtatatacgttttttggacgggaggacatgtatgaatccacaggtctgggactcattagc
agcagattacgaaccacattgaatagaatacaagagagtcttattgatctggaggcacca
cctgaaactgctggtccattgccagcaacagaagagaggaaagaaaaggttccgagccca
cacctgagccacctcgttgttttaaattccaatgaaacactatacggccttgcagaaagg
gttgttgccacagaatctttggtatttctagctgatcagtttgaatgtctgcagccacat
cttgatgccatgatgccttcagccaagaagccttttttgcagcagttttattcacagact
gtgtcaactgcaagtgagctgcgcaaaccaatttactggattgtggctgccaaagctatt
gattatgaacagatgctacatcttatggctaatgttaaatgggatatcaaagaaattatg
tcacaacacaatgtgtatatcgatactcttcttaaggagtttgaacagttcaataagaag
ttatctgaggtttccaaacgagtccgtataccactgcaggtttctaatgtcctctgggag
cattgtattcggctggctaacagaaccattgttgaaggttatgcaaatgcaaaaaaatgt
agtaatgagggacgtgccttgatgcagctggactttcaacagtttttaatgaagttggag
aagctgacagacatcagaccaattccggataaagaatttgtcgaaacttacattaaggcc
tattatttgactgaaaatgacatggaaagatggattaaagaacacagggaatattcaacc
aagcagctaaccaaccttgtgaatgtttgtttgggctcccatataaataaaaaagcacgg
cagaaactgatagcagctattgatgagtccgacaagcctaaaagatag
DBGET
integrated database retrieval system
