Rhincodon typus (whale shark): 109936368
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Entry
109936368 CDS
T06055
Name
(RefSeq) RNA-binding protein 5-like isoform X1
KO
K13094
RNA-binding protein 5/10
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109936368
Spliceosome [BR:
rtp03041
]
Complex A
Other components
Complex A specific factors
109936368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
OCRE
G-patch_2
RRM_1
Zn_ribbon_RanBP
DUF7066
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
109936368
NCBI-ProteinID:
XP_048462171
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All DBs
Position
16:12033056..12062999
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AA seq
687 aa
AA seq
DB search
MLSLGQSRGFAFVEFNHLQDATRWMEANQQRSLTILGKSVSMHYSTKPFEDWSCNKCGVT
NFKRRERCFKCDAQKPETEEEQVRVQSEPFMSDYANDTIILRNIGPHTPMESILSALAPY
AVLSPANVRLIKDKQTQLNRGFAFVQLDSSFEASHLIQILLALQPPLNIDGRTINVDFAK
SLKKDHILSDGNKISSSTVAITAIAAAQWSSSQVGQGSEDGSIDYSYFQPGQDGYSQYDQ
MAYSQDYGQQSGSADSTQQGLAVYQAPAVISAPPMVAKSATVSQDGQSYQSQNQSETQST
DTTPSDGTTESKDSSYPVPDVSTYQYDESSGFYYDAQTGFYYDPNSQYYYNPQTQQYMYW
DGEKQTYLPAPDQTTQQSKTASGTKSKEGKEKKEKPKSRTAQQIAKDMERWAKSLNKQKD
NVKTALQMIASKEEERRESAAADAGFALFEKRGMIERQPMVLEPFSGLVEHLRDDDESPL
KRKSSPLQGLVASYSGESEEEEQETVQELEEKLTDWNKIACLLCRRQFPNKEALTRHQQL
SDLHRQNLEIRRRSRMSDRELEALEKTENEMKYRDRAAERREKYGIPEPPEPKRKRFNNA
AIIDFEQPTKNGINSDNIGSRMLQAMGWKEGSGLGRNQQGITAPIQAQTRMKGAGLGARG
SSYGVTTSDSYKDAVKKAMFTRFNELE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctctaggtcaaagccgtggtttcgccttcgtggagtttaatcacttgcaggac
gcaacaagatggatggaagccaaccagcagcgttcccttaccattcttggaaagtccgtt
tcgatgcactacagcacaaagccttttgaagactggagttgcaacaagtgtggggtgact
aacttcaaacggcgagagagatgctttaaatgtgatgctcagaagcctgaaactgaagag
gagcaagttcgtgtgcagagtgaaccatttatgtctgactatgcaaatgacaccattatt
ttaagaaacataggtccacacactccaatggaatctatcctgagtgcattggctccatat
gctgtgctgtctcctgcaaatgtcaggttgatcaaggacaagcagacacaattaaacaga
ggatttgcctttgttcagctggattcatcttttgaagcttctcatctcattcagatactg
cttgctctgcagcctccgttaaacattgatggtcggaccattaatgtagattttgccaaa
tctttaaagaaggaccatatcctttctgatggtaataagatcagttcgtcaactgttgcg
atcacagctattgctgcagcccagtggtcgtcaagtcaggtggggcaaggatcagaagat
ggcagcattgactacagctactttcaacctggacaggatggctacagtcaatacgatcaa
atggcatattcacaagattatggacagcaaagtggctctgcagattctacccaacaggga
ttggcagtctatcaagcacccgcagtaatctcagctcctcctatggttgctaaatcggca
acagtttcccaagatggtcagtcctatcagtcgcagaatcaatctgagactcaatctaca
gataccactccatctgatggtaccacagagtctaaggattcaagctaccctgtgccagat
gtgtccacttatcaatatgatgaatcatctggattttactatgatgcgcagactggattc
tactatgacccaaactcccagtactattacaatccacagactcagcagtacatgtattgg
gatggagagaaacagacttatttgcctgccccagatcaaactacacagcaaagcaaaaca
gccagtgggactaaaagtaaagaggggaaagagaagaaggaaaaaccaaagagcaggaca
gctcaacagatcgccaaagacatggaacgatgggccaagagtctaaataaacagaaggat
aatgtcaaaactgctttgcagatgattgcatctaaagaagaagagaggagagaatctgca
gcagctgatgcaggatttgctttgtttgagaaaagggggatgatagaacggcagccaatg
gtacttgaaccattcagtggtttagtggaacatctacgggatgatgatgaaagtccgtta
aagagaaagtccagtccactacagggccttgtagcatcatacagtggagaaagtgaagaa
gaggagcaagagacagtccaagaactggaagaaaagctgacagattggaacaaaatagcc
tgtctgctgtgcagaagacagtttcccaataaagaggcacttactcggcatcagcaactc
tccgacctccacaggcaaaatttggaaattcgtagaaggtcgcgaatgtctgaccgagag
cttgaggcattagaaaaaacagaaaatgaaatgaagtacagagacagagcagcagaaaga
agagaaaagtatggaatcccagagcctccagaaccgaagagaaagaggtttaataatgct
gcaataattgattttgagcaaccgacaaagaatggtattaacagtgataacattgggagc
agaatgctacaggctatgggttggaaagaaggctcggggctgggtcgaaatcagcaaggt
attacagcacctatacaggctcaaacaaggatgaaaggcgctggtttgggagcacgagga
agttcgtatggcgttactacttcagattcctacaaagatgctgttaaaaaagctatgttt
acaagatttaatgaattggagtaa
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