Rhincodon typus (whale shark): 109936376
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Entry
109936376 CDS
T06055
Name
(RefSeq) zinc finger protein 239-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109936376
03021 Transcription machinery [BR:
rtp03021
]
109936376
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109936376
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109936376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
XPA_N
zf-met
zinc_ribbon_9
GAGA
LIM
Zn-ribbon_8
zf-Di19
C1_4
Motif
Other DBs
NCBI-GeneID:
109936376
NCBI-ProteinID:
XP_048475636
LinkDB
All DBs
Position
43:914256..957593
Genome browser
AA seq
324 aa
AA seq
DB search
MEKPWKCRVCGKGFSTPSALETHQRCHTGERPFTCSECGKAFTQSSSLLKHRRVHTGERP
FACFECEKRFSNSSHLLTHQRVHTGERPFICSECGKAFTQSSNLLMHQRVHTRERPFTCC
ECGKGFSDSSALLTHQHIHTGERPFTCSECGKGFTQSSNLLTHQRVHTGERPFTCSECGK
GFTQLAHLLTHQHVHSGKRPFTCPVCGKGFIQSCNLVMHQRVHTGERPSVCSHCGKGFRD
SSTLLTHQRIHTGERPFICSVCGKRFSQSSSLRRHWRVHTRDKLFTCSECGNGFSHLSSL
LRHQRVHKCLQGVDSAVAVNYTRD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaccgtggaaatgtagggtctgtgggaagggattctctacaccatctgcgctg
gaaacacatcaacgctgtcacactggggagaggccgttcacctgctcggagtgtggaaag
gcattcactcagtcatcttcccttctaaaacaccggcgggttcacactggggagaggccg
ttcgcatgttttgagtgtgagaagagattcagtaattcatctcacctgctgacacaccag
cgagttcacactggagaaaggccattcatctgctctgagtgtgggaaggcattcactcag
tcgtccaacttgctgatgcatcagcgggttcacactagggagagaccattcacttgctgt
gagtgtgggaagggattcagtgactcatctgccctgctgacccaccagcatattcacact
ggagagaggccattcacatgctctgagtgtgggaagggattcactcagtcatccaatctg
ctgacacaccagagagttcacactggggagagaccgttcacatgttctgaatgtgggaag
ggattcactcagttagctcacctgctgacacaccagcatgtacacagtgggaagaggcca
ttcacttgcccagtgtgtggaaaggggttcattcagtcctgcaatctggtgatgcaccag
cgagttcacactggggagaggccgtctgtctgctctcactgtgggaaaggattcagagat
tcatccactctgctgacacaccagcgaattcacactggggagaggccattcatttgctct
gtctgtgggaagagattcagtcagtcatccagtctgcggagacactggcgagttcacacc
agggacaaattgttcacctgctctgagtgtgggaatggattctctcatttatctagcctg
ctgagacatcagcgagttcacaagtgcttacagggagtggattctgctgttgctgttaat
tacacgcgggattga
DBGET
integrated database retrieval system
