Rhincodon typus (whale shark): 109936410
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Entry
109936410 CDS
T06055
Symbol
celf1
Name
(RefSeq) CUGBP Elav-like family member 1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109936410 (celf1)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109936410 (celf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
Motif
Other DBs
NCBI-GeneID:
109936410
NCBI-ProteinID:
XP_048462894
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All DBs
Position
17:complement(221894..313190)
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AA seq
487 aa
AA seq
DB search
MNGSLDHSDQPDIDSIKMFVGQIPRSWSEKELKELFEQYGAVYEINVLRDRSQNPPQSKG
CCFVTFYTRKAALEAQNALHNMKILPGMHHPIQMKPADSEKNNAVEDRKLFVGMISKKCN
ENDVRVMFSPFGQIEECRILRGPDGLSRGCAFITFATRSMAQNAIKTMHQSQTMEGCSSP
IVVKFADTQKDKEQKRMAQQLQQQMQQLNAATMWGNLAGLNTLGPQYLALYLQLLQQSAS
SGNLNALSNLHPMAGLNAMQLQNLAALAAAASAAQNTAPGTNALTTGSSPLSALTCSGSS
SSNSTSSSSVNPMASLGALQTLAGASGGLNVSSLAGMAALNGGLGSGGLSNGTGSTMDAL
TQAYSGIQQYAAAALPSLYNQCLLSQQSLSAAGSQKEGPEGGNLFIYHLPQEFGDQDLLQ
MFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSSQAAIQAMNGFQIGMKRLKVQLKRS
KNDSKPY
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggtctctggatcactccgaccagcccgacatcgactccatcaagatgtttgtc
ggtcagattccacggtcttggtcagagaaggaactgaaagaactctttgaacagtatggc
gctgtatatgaaatcaatgtgcttcgagacaggagtcagaatccccctcagagtaaaggt
tgttgctttgtaacattttatactcgtaaggcagcactggaagcacaaaacgctcttcac
aatatgaagattctgcctgggatgcaccatcctatacagatgaaaccagctgatagtgag
aagaataatgcagtggaggacagaaagctgtttgttgggatgatttccaagaagtgcaat
gagaatgatgtccgtgtcatgttttcaccatttggacagatagaagaatgtcgaatattg
cggggtccagacggactgagtcgaggctgtgcatttattacattcgccacccgctccatg
gcccagaatgcaatcaagaccatgcaccagtcacagacgatggagggttgttcttcaccg
attgttgtgaagtttgctgacacccagaaggacaaggaacagaagcgtatggctcagcaa
ctccaacagcagatgcagcagcttaatgcagccaccatgtggggcaacttggctggactc
aacacactgggacctcagtatctagcactttatttgcagctcctacagcagtcagcgtcc
tcggggaacctcaatgcactgagcaacctacatcccatggctggtctgaatgccatgcag
ttacagaacctcgctgctctggctgcagcagcaagtgcagctcagaacacagcaccaggc
accaatgcattgacgacaggcagcagtcccctgagtgcattgacatgttcagggtcttca
agcagtaacagtaccagctcctcatcggtgaacccaatggcatcgctgggggcactgcag
acgctggcaggggcatcaggcggtctcaacgtcagctctttagcaggtatggcagctttg
aatggagggcttggatctggaggcctgtcgaatggtacaggcagtaccatggatgctctg
acacaagcatactcagggattcagcagtatgcagctgcagcactcccctccctctacaac
caatgtctcctcagccagcagagcctcagtgcagcagggagtcagaaagaaggaccagag
ggaggtaatctatttatttaccatctgccccaggagtttggtgatcaagatctactccag
atgtttatgcctttcgggaatgtcgtttctgccaaggttttcattgacaaacagacaaac
ctgagtaaatgttttgggtttgtaagctatgacaacccagtttcctcacaggctgccata
caagcaatgaatggctttcagattggcatgaagcgccttaaagttcaactcaagcgctcg
aagaatgatagcaagccatactga
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