Rhincodon typus (whale shark): 109936576
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Entry
109936576 CDS
T06055
Symbol
extl2
Name
(RefSeq) exostosin-like 2 isoform X3
KO
K02369
alpha-1,4-N-acetylglucosaminyltransferase EXTL2 [EC:
2.4.1.223
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
rtp01100
Metabolic pathways
Module
rtp_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
109936576 (extl2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rtp01003
]
109936576 (extl2)
Enzymes [BR:
rtp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.223 glucuronosyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
109936576 (extl2)
Glycosyltransferases [BR:
rtp01003
]
Glycan extension
O-Glycan
109936576 (extl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Vts1
Motif
Other DBs
NCBI-GeneID:
109936576
NCBI-ProteinID:
XP_020390769
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All DBs
Position
10:complement(21422399..21439958)
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AA seq
325 aa
AA seq
DB search
MRFTRRLIGGGILPSYLVMAILIVFIVGAALTTLLPKVVESGAVVHREQDNQRTDIQNSF
TIIMQSYNRTDLLLKLLNHYQAVPNLHKIIVVWNSVGIKPPTDLWDSLGPHPIPVLFKEQ
TANRMRNRLEPIPELETKAVLMLDDDILISAYDLDFAYSVWQQFPDQIVGFVPRKHVTTS
SGIYSYGSFELQNALGGSGDHYSMVLIGAAFFHASYLEKFKGQHPAVHSLIDKTQNCDDI
AMNFIVAKQTGKPSGVFVKPVDMRNLEKDSNGGFNGMWHRAEHLLQRSWCLNQLAAIYGS
MPLKYSNIMISQFGFPNYANHKTKT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagatttacaagacgacttattggtggtgggatacttccctcttatttagtgatggct
atcctaattgtcttcattgtgggagctgctctgacgacattattgcctaaagttgtggaa
agtggtgctgttgtccatagggagcaggataaccagagaaccgacattcagaattccttc
accattatcatgcagtcttacaacaggacagacctgcttcttaaactgctgaatcactat
caggccgttccaaatttacacaagatcattgtggtctggaatagtgttggaataaaacca
ccaacagacttatgggattcattgggaccacatcccatccctgttctctttaaagaacag
actgcaaatagaatgcggaaccgactggagccaattccagaactggaaaccaaagctgtc
ttgatgcttgatgatgatatcttaattagtgcctatgaccttgattttgcctactctgtt
tggcagcaatttccagatcaaattgtcgggtttgttccccggaaacacgtcacaacttct
tcaggaatttacagctatggcagttttgaactccagaatgcactgggtggaagcggtgac
cattactccatggtgttaattggagctgcattttttcacgccagttaccttgaaaagttt
aaaggtcaacacccagctgtccacagcctaattgacaagacccagaattgtgatgacatt
gcaatgaattttatagttgccaagcagactgggaagccatcaggagtgtttgtgaagcca
gtggacatgagaaatctggaaaaagattccaacggtggcttcaatggcatgtggcatcgg
gcggaacacttgcttcaaaggtcctggtgtctgaatcagctggctgctatctatggaagc
atgcctctgaaatattccaacattatgatctctcagtttgggttccccaactatgcaaat
cataaaacaaaaacctga
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