Rhincodon typus (whale shark): 109936591
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Entry
109936591 CDS
T06055
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a
KO
K23619
collagen type XXVIII alpha
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109936591 (col28a2a)
Peptidases and inhibitors [BR:
rtp01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
109936591 (col28a2a)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
109936591
NCBI-ProteinID:
XP_048455166
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Position
7:46024250..46121929
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AA seq
1180 aa
AA seq
DB search
MKNFSHVDILEKLRLFSLNKAERKRVLTEVSKIIWDLNRVGRMKAFFQFWGLLLWTRYQL
VLSQDYEERGDGHLVRRQKIKYLSSNAPGENEQEEDCNLEIAFLLDSSESAKDFNHNREK
SFVLDFVDRLQQLRVSSGRQLVPRVALLQYSSTVLIEQTFRDWSGPAVFRTRVAPIGYIG
HGTYTTYAITNLTQLYLNEAVPGSVRVAVLMTDGVDHPRNPDIYAATTEAKNQGIKFFTV
GMSPVANEPPNAAKLRLLASPPASRFVHNLQDSSALGKLLLEVAELADEGCPKIPKCICE
KGERGPPGSSGKKGRPGDDGAPGLKGQKGEAGLSGIPGRDGMEGRAGYKGEQGERGECGL
PGTKGDRGPEGPVGPRGLRGVQGYPGSPGDQGPAGFQGRKGERGLPGPPGLTGETGIGFP
GPKGNIGFVGRPGPIGPPGIGEPGLPGPPGPQGLQGDRGLPGEGWPGVKGDRGYEGPKGP
RGAPGIGVKGDKGEIGFPGLPGPIGPSGIGFQGEKGEQGPRGPPGPKGPPGEGLPGSKGD
QGLPGEVGAPGERGLGEPGPKGEPGSSGLAGLPGLPGEDGAPGQKGEPGAPGPRGAEGAV
GIGIQGEKGDIGQRGLRGLVGPPGATGPMGPKGEPGVLGRPGMPGLTGRGIMGLKGDPGP
PGPVGPVGETGVGILGPKGDRGLPGPPGPFGQKGDGYPGAPGLPGLPGPTGEQGPIGIGF
PGPKGDPGARGPSGLPGPSGEGIQGQKGISGRPGPPGPQGPPGEGMQGPKGDIGVQGLPG
PRGPPGEGLMGPKGDRGLSGERGQKGGKGDVGDSGSPGLPGRPGVKGDPGLTREDIIRMI
KEICGCGIKCKERPMELVFVIDSSESVGPDNFEIIKDFVTALVDKVTVGRNATRIGLVLY
SLEVRLEFGLSRYLTQQDVKQAIRKMLYMGEGTHTGTAIRKATQEGFYGARPGVKKVAVV
LTDGQADRRETVKLDVAVREAHAANIEMFAIGIVNTTDPTQAEFLRELNLIASDPDTEHM
YLIDDFNTLAALESKLVRQFCEDENGALIYNRVGNGMNQNPKAHDKEKEDYKFRVLSTTS
KGGSYVSTSQQVPGLHSQSVKPVKESTLSVSPTVKIPVSDPPCQLHLDQGTCRDYVIKWY
YDKQANACAQFWYGGCNGNANRFDTEDKCRKTCVVSSAES
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttcagtcatgtggatatattggagaagctgcgactgttctccttgaacaaa
gctgaacgaaaaagagttttgacagaagtttccaaaatcatatgggatctgaacagagtg
gggagaatgaaagctttcttccaattctgggggcttctgctgtggacaagataccagctc
gttttatcgcaagactatgaggaacgtggggacggacatttggttagaagacaaaaaatt
aagtatctctcatcgaatgcaccaggagaaaatgaacaagaggaggattgcaatttggag
attgccttcctgttggacagttcggaaagtgctaaggacttcaaccacaaccgggagaag
agctttgtgctggattttgtggataggctgcagcagctgagagtgtcgagtggtcgccag
ctggtgcccagagtggcactcctgcagtacagcagcacggtgctcattgagcaaaccttc
cgtgactggagtggcccggcagtcttcaggactcgtgttgctccgattggctacattggg
catggcacctacaccacgtatgccatcaccaacctgacacagctctacctgaatgaggca
gtccctggcagtgtccgggtagcagtgctcatgaccgatggtgtggaccacccaagaaac
ccagatatctacgcggctacgactgaggccaagaaccaaggcatcaagttcttcacagtc
ggcatgtcacccgtggccaacgagccacccaatgcagctaaactgcgccttctagccagt
ccgcctgcttcccgctttgttcacaacctccaagacagcagtgccctgggcaaactcctc
ctggaggtggcagaattggctgatgaagggtgtcccaaaataccaaaatgtatctgtgaa
aaaggagaaagaggtccaccaggttcttctgggaaaaaaggacgccctggtgatgatggt
gctccaggactgaaaggacaaaagggggaagcaggtctgagtggaatcccaggaagggac
ggaatggagggaagagctggatacaaaggtgaacagggtgaaagaggtgaatgtgggctt
ccagggacaaaaggtgacaggggaccagaaggcccagtgggtccaaggggactgagaggc
gtacagggttaccctggatcccctggggaccaaggaccagcaggtttccaaggaaggaag
ggtgaacgtggacttcctggaccacctggactaactggtgaaactggaataggctttcct
ggcccaaagggtaatattggttttgtaggaagaccagggcctattggcccacctgggatt
ggtgaacctggactaccaggtcctccagggcctcaaggtcttcagggagatagaggttta
cctggagaaggttggccaggagtgaagggtgatcgtggatatgaaggaccaaagggacct
cgtggagctccaggtatcggtgttaaaggtgataagggtgaaattggttttcctggatta
cctgggcctattggaccatccggaattggattccaaggtgaaaagggagaacagggtcca
cgaggtccacctggcccgaaaggacctccaggtgaaggactgcctggatcaaagggggat
caaggtttgcccggagaagttggagctccaggagaaaggggacttggagaaccaggacca
aaaggtgaacctggctcctctggattggcaggtctccccggtcttccaggagaagatggt
gctccaggacaaaagggtgaaccaggagcgccaggtccacgaggggctgaaggtgctgtg
ggcattggaattcaaggagagaagggtgatataggtcagaggggactacgaggtttggtt
ggtccacctggagcaacaggcccaatgggaccaaagggtgaacctggtgttctggggcgc
ccaggaatgccaggccttacaggacgtggcattatgggacttaagggtgatccaggtccc
cctggtcctgttggccctgtgggtgaaactggagttggaattcttggcccaaagggtgat
cgtggcctcccaggaccaccagggccatttggacaaaaaggagatggatacccaggagcg
cctgggttgccaggcctcccagggcccacaggtgaacaggggcctatcggaattggattc
ccagggcctaagggtgatccaggagcaagaggcccaagtggtctacctggaccatcagga
gaagggattcaaggtcaaaagggaatatctgggagaccaggaccacctggtcctcaaggg
cctccaggtgaaggcatgcagggacctaagggggacataggtgttcaaggtttgccagga
cctcgtggaccaccaggagaagggctcatgggacctaagggtgaccgtggtctttcagga
gaaagaggacaaaagggagggaaaggagatgtgggtgattctggctctcctggtttgcct
ggtagacctggagtaaagggtgaccctggattaacaagagaggacatcatcagaatgata
aaggaaatctgtggttgtggaattaaatgtaaagaaagaccaatggaacttgtctttgtg
attgatagttcagagagtgtgggtccagataattttgaaatcataaaagatttcgtcact
gcactcgttgacaaagtaacagttggtagaaatgccacccggattggtcttgtgctctac
agcttggaagtacgattagaatttggtctaagtcgataccttacacagcaagatgtcaaa
caggcaatcaggaaaatgctatacatgggagaaggcacacatactggaactgccattcgc
aaagcaacacaggagggattctatggagctcggcctggtgtgaagaaagttgctgtagta
ttaacagatgggcaggcagacagaagggagactgttaaactggatgttgctgtacgtgag
gctcatgctgcaaacatagagatgtttgcaattggtattgtaaataccacagacccaact
caagctgaattcttacgtgagctgaacctaattgcttcagatcctgatactgagcatatg
tacctcattgatgatttcaatacccttgcagctctggaatcaaaattggtcagacagttc
tgtgaagatgaaaatggtgcattgatttacaatcgtgtcggaaatggaatgaaccaaaat
ccaaaagcacatgataaggagaaagaggattacaagtttcgggttctgtcaactacttca
aagggtggtagctacgtctcaaccagtcaacaagttccaggtctacactcacaatcagtt
aaaccagtgaaagaatccacattgtcagtatccccaacagtaaaaataccagtttcagac
cctccctgtcagctccacttggaccaaggaacatgtcgtgactatgtaattaaatggtat
tatgacaaacaggccaatgcttgtgcacagttttggtacggtggctgcaatggaaatgct
aatcgttttgacactgaagataaatgcaggaagacctgtgtagtttccagtgcagaatcc
tga
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