Rhincodon typus (whale shark): 109936728
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Entry
109936728 CDS
T06055
Name
(RefSeq) oxysterols receptor LXR-beta-like
KO
K08535
liver X receptor beta
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109936728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109936728
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
rtp03310
]
109936728
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
109936728
Nuclear receptors [BR:
rtp03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
109936728
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
109936728
NCBI-ProteinID:
XP_048473422
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Position
37:13169895..13196798
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AA seq
437 aa
AA seq
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MSFPAVNGLDAGHEGDKSITEPVTEDSADSAQHHVKEEEVEESGDCVATLHNGTFSAEPE
FSLSICGDEPMVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSA
QYTCKNSGKCEMDMYMRRKCQECRLRKCREAGMREHCVLSEEQIRNKKQKKREDDMAQTL
VVTAEDSPVAVDIARLTVEQEEMIQQLVAAQQQCNKRSFSDQPKVTPWPQSNDPHNRETR
QQRFAHFTELAIISVQEIVDFAKQIPGFLDLSREDQIALLKASTIEIMLLETARRYNHET
ECITFLKDFTYSKDDFARAGLQVEFINPIFEFSKGMRKLQLDDAEYALLIAINIFSADRP
NVQDHALVERLQQPYVEALHSYLRIKRPKDHLMFPRMLMKLVSLRTLSSVHSEQVFALRL
QDKKLPPLLSEIWDVHE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccagctgtaaatggcttggatgctggccacgaaggtgacaaaagtatcaca
gagcctgtcacagaggacagtgcagacagcgcacagcatcatgtgaaggaagaggaggtg
gaggagagtggtgactgtgtcgccacgctccataatggtacattctccgccgagccagaa
ttttccctaagtatctgtggggatgagccaatggtaaagcgcaagaagggcccagccccg
aagatgttggggaatgaggtttgcagcgtctgtggggacaaggcatcaggctttcactac
aacgtgctgagctgtgagggctgtaaaggcttcttccgtcgcagtgtcatcaagagtgca
caatacacctgcaagaacagtggcaagtgtgaaatggacatgtacatgcgcaggaaatgc
caggagtgccggctgcgaaaatgtcgcgaggcaggaatgagagaacattgtgttctgtcg
gaagagcagatccgcaacaagaagcagaagaagcgggaggatgacatggctcagacgttg
gtggtgacagcagaggactcaccggtggcagtggacatcgccaggctcacggtggaacag
gaagagatgatccagcagctggtggccgcacagcagcagtgtaacaagcgatcattcagc
gaccagccgaaagtaacgccttggccacaaagtaatgacccccacaatcgagagacacga
cagcaacgctttgcccacttcacagagttggcaatcatctccgtgcaagagatcgtcgac
tttgccaagcagattccgggcttccttgacctctcacgggaggaccagattgcactattg
aaggcatccacaattgagattatgttgctggagacagcacggcgatataaccatgagaca
gaatgcatcactttcctcaaggatttcacatacagcaaagatgactttgcacgggctggg
ttgcaggttgaattcataaacccaatctttgaattttcgaaaggtatgaggaagctgcaa
ttagatgacgccgagtatgccctgctcatagccatcaacatcttctcagcagaccgacct
aatgttcaagaccacgcattggtggagaggctccagcagccgtatgtagaagcacttcat
tcgtacttgcgcatcaagagaccaaaggaccacctgatgtttcctcggatgctgatgaag
ctggtcagtctccggaccctgagcagtgtccactcggaacaggtctttgccctcaggctt
caggacaagaagctgccacccctgctttctgaaatatgggacgttcacgagtga
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