Rhincodon typus (whale shark): 109936906
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Entry
109936906 CDS
T06055
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04210
Apoptosis
rtp04530
Tight junction
rtp04540
Gap junction
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109936906
09143 Cell growth and death
04210 Apoptosis
109936906
09144 Cellular community - eukaryotes
04530 Tight junction
109936906
04540 Gap junction
109936906
09142 Cell motility
04814 Motor proteins
109936906
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109936906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109936906
03036 Chromosome and associated proteins [BR:
rtp03036
]
109936906
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109936906
04147 Exosome [BR:
rtp04147
]
109936906
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109936906
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
109936906
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
109936906
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109936906
Exosomal proteins of other body fluids (saliva and urine)
109936906
Exosomal proteins of colorectal cancer cells
109936906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
109936906
NCBI-ProteinID:
XP_020391107
LinkDB
All DBs
Position
7:complement(93803398..93810344)
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGHRPDMKNANEADDSFDTFFCETGTGK
HVPRAIFVDLEPTVIDEIRTGTYRQLFHPEQLITGNEDAANNYARGHYTIGKELIDSVLD
RICKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPRISTA
VVEPYNSILTTHTTLEHTDCSFMVDNEAIYDICHKNLDVEHPGYINLNRLIGQIVSSITA
SLRFDGALNVDLAEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPGN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKARRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSIADEEEEEEEF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctccatccatgttggccaggctggtgtccagatgggcaatgcctgc
tgggagctgtactgtttggagcatgggatccagcctgatggtcaccgacctgatatgaaa
aatgcaaatgaggctgatgactcctttgacaccttcttctgcgagactggaaccgggaaa
catgtgcccagagcaatctttgtggacttggagccaactgtgatcgatgaaattcgtact
ggtacttatcgtcagctgttccaccctgagcagctcatcactgggaatgaagatgctgcc
aataactatgcccgtgggcactacacaattggcaaggagctgattgactctgtcttggac
cgaatttgcaagttggctgaccaatgcaccggtcttcaaggtttcctggtcttccatagt
tttggtggaggcacaggctcaggattcacctcactgctgatggaacgtctctcagttgac
tatggcaagaagtccaagctggagttttccatctacccagctcccaggatctccacagct
gtggtggaaccttacaactccatcctgaccactcacaccacactggaacacactgattgt
tccttcatggtggacaatgaagccatctatgacatctgccacaaaaacctggatgttgaa
catccaggttacatcaacctgaaccgtctgatcgggcaaattgtgtcatcaatcacagct
tctctccgctttgatggagccctaaatgttgacttggcagaattccaaactaacttggtg
ccttatccacgtatccatttccctctggtgacatatgccccagtcatctcagctgagaaa
gcttaccatgagcagctgtctgtggctgagatcaccaatgcctgctttgaaccaggcaac
cagatggtcaagtgtgacccacgccatggcaagtacatggcttgttgcctgctctaccgt
ggtgatgtggtgccaaaagatgtcaatgctgccattgccaccattaaggccaggcgttcc
atccagtttgtggactggtgcccaactggtttcaaagttggcatcaactaccagccccct
acagtggtgcctggtggggacctggccaaggtgcagcgagctgtgtgtatgctaagcaac
accacagccattgctgaagcctgggctcgtcttgaccacaagtttgatctgatgtacgcc
aagcgtgcctttgtgcattggtacgtgggtgaggggatggaggaaggggaattctcggag
gctcgtgaagacatggctgccttggagaaagattatgaagaggttggtgctgacagtata
gctgatgaggaagaggaggaggaggaattttga
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