Rhincodon typus (whale shark): 109936974
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Entry
109936974 CDS
T06055
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109936974 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109936974 (gtf2b)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109936974 (gtf2b)
Prokaryotic type
Archaeal type
TFB
109936974 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
ORC6
Motif
Other DBs
NCBI-GeneID:
109936974
NCBI-ProteinID:
XP_020391182
LinkDB
All DBs
Position
10:68396163..68423737
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AA seq
338 aa
AA seq
DB search
MPRVYKRRPEPQFASHSSPSANMASGSRGDPLPRVQCPNHPDAILVEDYRAGDMICPECG
LVVGDRVIDVGSEWRTFSNDKATKDPSRVGDAQNPLLNGGDLSTMIGKGTGSASFDEFGN
AKYQNRRTMSSSDRAMMNAFKEISNMSDRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDA
IASACLYIACRQEGVPRTFKEICAVSRIPKKEIGRCFKLILKALETSVDLITTGDFMSRF
CSNLGLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASADKRTQKEIGDIA
GVADVTIRQSYRLIYPRAADLFPAEFKFDTPVDKLPQL
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgtttataaaaggaggccggagccgcaattcgcctctcactcctccccctcg
gccaatatggcgtctggtagtcgtggggatccattgcccagagtgcaatgtccaaaccat
ccagatgccattttggtagaagattaccgtgctggtgatatgatctgccctgaatgtggt
ctggtagtaggtgatagagttatagatgttggctcagaatggcggacgtttagcaatgac
aaagcaacaaaagatccatctagagttggtgatgcccagaatcctcttctaaatggcggt
gatttgtcaactatgattggaaagggtactggatcagcaagttttgatgaatttgggaat
gcaaaatatcaaaatcgtcggactatgagtagctctgatcgagcaatgatgaatgcattc
aaggaaatcagtaatatgtctgacaggataaatctccccagaaatattgttgatcgaaca
aataatttatttaaacaagtgtatgaacaaaaaagcttaaagggaaggagtaatgatgcc
attgcttctgcctgtttgtacattgcctgtaggcaagaaggtgtaccacgaacattcaaa
gaaatatgtgcagtatccaggattccaaagaaggaaataggccgttgcttcaagttgatt
ctgaaagctctggaaaccagtgtggatctaattactacaggagattttatgtccaggttc
tgttcaaacttgggattgcctaaacaagtacaaatggctgcaacgcatattgcaaggaaa
gctgtggaactggatttggtgcctggtagaagccctatttcagtagctgcagcagctatt
tatatggcatcgcaagcttcagcagacaaaagaacacagaaagagattggagacattgct
ggggtagctgatgttacaattaggcagtcctacagactcatctatccacgagctgctgac
ctcttccctgctgaatttaaatttgatactccagttgacaaactaccccagttgtaa
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