Rhincodon typus (whale shark): 109936998
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Entry
109936998 CDS
T06055
Name
(RefSeq) PDZ domain-containing protein GIPC1-like
KO
K20056
PDZ domain-containing protein GIPC
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109936998
Membrane trafficking [BR:
rtp04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
109936998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIPC1_GH1
GIPC1_GH2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
109936998
NCBI-ProteinID:
XP_020391205
LinkDB
All DBs
Position
38:3735564..3765608
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AA seq
328 aa
AA seq
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MPLGRWKKAAPLVDNDEADAESRQLEPEVAGGEPGSGPGSGSASSSGPPLRPRLVFHTQL
AHGSATGRVEGFTNVRELYTKLGEAFNMEPAQIMFCTLNTHKVDMDKLLGGQIGLEDFIF
AHVKGQKKEVEIYKSEDALGLTITDNGAGYAFIKRIKEGSLIDRIEAIKVGDLIESINGQ
SVIGFRHFEVAKLLKGLVKGQLFTLRLVEPLKAFDMIGQRSRGGKFASGGQVGTGKGTLR
LRAKGIATVEDEPSAFEEKAIEKVDDLLESYMGIRDTELAATMVDLGKNKKNPDEFAQAL
DEELGDFAFPDEFVFDVWGAIGDAKAGR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgggtcgctggaagaaagctgctcccctggtggacaacgacgaagcggatgcc
gagagccggcagctggagccggaggtggcgggcggggagccgggttcgggccccgggtca
gggtcggcctcctcctcaggccccccgctccggccgcgcctggtcttccacacgcagctc
gcgcacggcagcgccaccggccgcgtggagggtttcaccaacgtccgggagctctacacc
aaactcggggaggcgttcaacatggagccggcacagattatgttctgcactctgaacact
cacaaagtggacatggacaaactgctaggtgggcaaattggccttgaagatttcatcttt
gctcacgtcaaagggcagaagaaagaagttgaaatctacaagtcggaagatgctttggga
cttaccatcactgacaatggagcaggttacgcatttatcaagagaatcaaagaaggaagc
ctcattgaccgaatagaggcaatcaaggttggggatcttattgagtcgatcaatggtcag
agtgtcatcggttttcgccacttcgaggttgccaagctgctgaaaggtttggtgaaggga
cagctgtttacactgcgtcttgtggagcctcttaaggctttcgacatgataggccagcgt
tccagaggaggcaaatttgcatctggtgggcaggtgggcactggaaaaggaacactacga
ctgagggcaaaaggcattgctactgtggaggatgagccatcagcatttgaagagaaggcc
attgagaaggtggatgacctgctggaaagctacatggggatcagagacactgagctagct
gctactatggtggaccttggcaaaaataagaagaatccagatgagtttgcacaggcactt
gacgaggaacttggtgactttgcatttcccgacgagtttgtcttcgatgtctggggcgct
atcggagatgccaaggctgggcgataa
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integrated database retrieval system
