Rhincodon typus (whale shark): 109937057
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Entry
109937057 CDS
T06055
Name
(RefSeq) B-cadherin
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04371
Apelin signaling pathway
rtp04514
Cell adhesion molecules
rtp04520
Adherens junction
rtp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
109937057
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
109937057
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
109937057
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
109937057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109937057
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rtp04515
]
109937057
04090 CD molecules [BR:
rtp04090
]
109937057
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
109937057
Cell adhesion molecules [BR:
rtp04515
]
Cadherins
Major cadherins
109937057
CD molecules [BR:
rtp04090
]
Proteins
109937057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
TM_ErbB1
Fibulin_C
Gram_pos_anchor
Motif
Other DBs
NCBI-GeneID:
109937057
NCBI-ProteinID:
XP_048448730
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
LIAVAKDSDGKNVEQPVDIMIKVIDQNDNKPEFTSSTFYGYVAEGATPGTSFMNITATDK
DQKDSLNGIIRYSILSQEPELPSRNMFTISSQTGLITVQSTGLDRELVNKYTLTIRAADL
EGAGLFAEATAIITITDTNDNAPQFETKEVTVEVRENEIDYDVTSLSVTDKDEPNSPSWK
ANYSIVFGNERQQFAMETDLHNNGVLKLVKRLDYEKSKQHRVIIEVRNQIPLTSTMPLSS
ATVIINVLDVNEAPIFDPETKVDKKSENLPVGSTVTSCSAKDPDNAQDQIVRYRMGSDPA
KWFEIESDTGIIKLVSKMDRESPYVENSIYTATILAYDDGTPPATGTGTLLLELEDVNDN
TPIATAPLNRVCNHNPLPVNVTILDKDIPPNTFPYIVQPAHGAEQNWTIKNTENNDVVML
LLKKVVEPGIYEVPLKVTDSGKPQLSQVTGLQVQVCDCHDNGACKERIAAAAFGISSILA
ILGAILALLLLVLLLLLFVKRRRNVKKEPLLPEEDVRDNIYYYDEEGGGEEDQDYDLSQL
HRGLDARPEVVRNDVAPLLLAPQYRPRPANPDEIGNFIDENLKTADNDPTAPPYDSLLVF
DYEGGGSEAESLSSVNSSTNSDLDQDYDHLNDWGPRFKKLAEMYGGGEE
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
ttgatagctgtcgcaaaagattcagatggaaagaatgttgaacaacccgtagacataatg
atcaaggtcatcgaccagaatgataacaagcctgaatttacctcttcaacattctatgga
tatgttgcagaaggggctacaccaggtacctccttcatgaacataacagccacagacaaa
gaccaaaaagattctctgaatggtataattaggtactcaattctgagtcaagaaccggag
ttacccagcaggaatatgtttacaattagttcacaaacaggattaataactgtgcagagt
actggacttgacagagagttggtaaataaatatacacttacaattcgagcagccgatttg
gaaggggctggcttgtttgccgaagctactgcaataatcaccattactgacaccaatgac
aatgctccgcaatttgagactaaagaggttactgtagaagtacgtgaaaatgaaatcgat
tatgatgtgacaagtctctctgtaactgacaaagatgagcctaactcacccagctggaaa
gcaaactacagcatcgtttttggaaatgagagacaacagtttgcaatggagactgatttg
cacaataatggagtccttaagttagttaagcgcttggattatgagaagagcaaacagcat
cgggtgatcattgaagtgaggaatcaaatacctttgacctcaaccatgccgctttcctct
gctacagtcatcatcaatgtactagatgttaatgaagcaccaatatttgatccagaaact
aaggttgacaagaagtctgagaatctaccagtaggaagtacagtaacctcctgctcagca
aaggaccctgacaatgctcaagaccaaattgttagataccgaatgggaagtgacccagca
aaatggtttgaaattgagtcagatactggtatcattaagctagttagtaaaatggacaga
gagtctccatatgttgagaacagcatatatactgcaacaatactcgcttacgatgatggg
actccacctgctactggtactggaaccctccttctggagcttgaagacgtcaatgacaat
acacctattgctactgctcctttaaaccgtgtgtgcaatcataatccgcttcctgtcaat
gtaaccattctggacaaagacatcccacccaacacttttccatacattgtgcagccagct
catggagctgagcaaaactggacaatcaaaaacacggaaaataatgatgtggtaatgtta
ctactgaagaaagtagttgagcctggcatatatgaagttcctttaaaagtaacggacagt
gggaagccacagctgtctcaggtcacaggactgcaggtgcaggtttgtgactgtcatgac
aatggagcatgtaaagagaggatagctgctgcagcattcggaatctccagcattttggct
attctgggtgccatcttagcattactgctcttggtgctgctgcttctgctatttgtgaaa
aggaggcgaaatgtcaaaaaagagcccctactgcctgaagaagatgttcgggacaacatt
tattattacgatgaagaaggtggtggtgaggaagaccaagattatgatctgagtcaactg
cacagaggtttagatgcaaggcctgaagttgttcgtaatgatgtggctccattactcttg
gcaccacagtatcggccacgcccagcaaacccagatgagattggcaactttattgacgag
aatttgaagacagcggataatgatcctactgctcctccttatgactccctcctggtgttt
gattatgaaggcggtgggtcagaagcagaatctttgagctcagtgaactcgtccaccaac
tccgatttagaccaggattacgaccacttgaacgattggggaccacgcttcaaaaaacta
gctgagatgtacggcggtggggaagaatga
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