Rhincodon typus (whale shark): 109937201
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Entry
109937201 CDS
T06055
Name
(RefSeq) proteasome subunit alpha type-6-like isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
109937201
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rtp01002
]
109937201
09182 Protein families: genetic information processing
03051 Proteasome [BR:
rtp03051
]
109937201
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
109937201
Peptidases and inhibitors [BR:
rtp01002
]
Threonine peptidases
Family T1: proteasome family
109937201
Proteasome [BR:
rtp03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
109937201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
109937201
NCBI-ProteinID:
XP_020391391
LinkDB
All DBs
Position
39:5397511..5439596
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AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTTVAVRGKDSVVAVTQKKVADKL
IDASTVTNLYHLTDKIGCVMTGMLADCRSQVQRARYEATKWKYKYGYDIPMDMLCKRMAS
ICQVYTQNAEMRPLGCCMIMLAIDDERGPQLYKSDPAGYYCGYKATSAGVKQIEASSHLE
KKIKKKPDLTYKATVELAISCLSTVLALDFKATEIEVGVVTADNPKFRTLSVTEIEKHLV
DIAERE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcggctccagcgctggctttgatcgtcacatcaccatcttttcccccgagggg
agactctaccaagtcgagtatgcattcaaagctataaaccagggtggccttacaacagtg
gccgtgagggggaaggattcggtcgttgccgtgacccagaagaaagtggcagacaagctc
atcgatgccagtacagtcacaaatctttatcatttgactgacaagattggttgtgtcatg
actggaatgctcgcggattgccgctcccaggttcagagagcacgctatgaagccacgaag
tggaaatacaagtacggctatgacatcccaatggacatgttgtgcaagcgaatggctagc
atctgccaggtttatactcagaacgcggaaatgagacctttgggatgttgtatgatcatg
ttagcgattgatgatgagagaggaccccagctttacaagtctgatcctgctggttactac
tgtggctacaaggctaccagtgctggagtcaaacagatagaagccagcagccacttggag
aagaagattaaaaagaagccagatctgacctacaaggccactgtagagctcgctatttcc
tgcctgtccaccgtcttggcacttgacttcaaagccacggagatcgaggtcggggtggtg
acagcagataatcccaagttcaggaccctcagtgtgacagagatcgaaaagcatctcgtg
gacattgcagaaagagaatag
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