Rhincodon typus (whale shark): 109937212
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Entry
109937212 CDS
T06055
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 2-like
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04145
Phagosome
rtp04814
Motor proteins
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109937212
09142 Cell motility
04814 Motor proteins
109937212
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109937212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109937212
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109937212
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
109937212
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
109937212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_EML
WDR55
Dynein_IC2
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_like
Beta-prop_IP5PC_F
WD40_RFWD3
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
109937212
NCBI-ProteinID:
XP_020391404
LinkDB
All DBs
Position
7:complement(45766442..45843293)
Genome browser
AA seq
603 aa
AA seq
DB search
MSDKDKSELKAELERKKQRLAQIREEKKRKEEERKKKEADQKKELVQNEESDIEKKRREA
EALLQSMGITPEPSVVPPTSPPSKSVSTPSEAGSQDSADCSLGPRRGAIKLEMAKITQVD
FPPREIVTYTKETQTPVIAQNTEAEEEEEDIVPKQAIEPEPEQVQKEEVKEGAPRELTEE
ERQQIIHSDEFLTFFDHSTRIIERALAEHKDLFFDYSGKDLEEKEGELQGGAKLSVNRQF
FDERWSKHRVVTCMDWSPQYPELLVASYNNNEDVPHEPDGVALVWNMKFKKTTPEYVFHC
QSSVMSASFARFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNVVG
SQNAHNLISVSTDGKICSWSLDMLSQPQDSMELMHKQSKAVAVTCMSFPLGDVNNFVVGS
EEGSIYTACRHGSKAGISEIFDGHQGPITGIHYHTAAGPADFSHLFVTSSFDWTVKLWTT
KNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGMGRLDLWNLNNDTEVPTASITVDSNP
ALNRVKWAQTGREIAVGDSEGQILIYDVGEQIAVPRNDEWTRFARTLAEINANRADAEDE
LAA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaagacaaaagtgaacttaaagcagaattagagcgcaaaaagcagcgcttg
gctcaaatcagggaggaaaagaaaaggaaagaagaggaaagaaagaaaaaggaagctgat
cagaaaaaagagttggtacaaaatgaagaatctgatattgaaaagaagcgaagagaagct
gaggcattgctacagagcatgggcattacacctgagccctctgttgtccctcctacatct
cctccctcaaaatcggtgagtacaccaagtgaggctggaagccaggattctgctgattgc
agtcttgggccaagacgaggagccattaaactggagatggcaaaaatcacccaggtagac
tttcctccgcgagagattgtcacatacacaaaggaaacacaaactccagtgattgcacaa
aatactgaagctgaagaggaggaggaagatattgtacctaagcaagcaattgaaccggaa
ccagaacaagtacaaaaagaagaagttaaggaaggtgcaccacgtgagcttacagaagag
gaaagacagcaaattattcattctgatgaattcctcacattctttgatcacagcaccaga
ataattgaacgagctcttgcagaacataaagatctcttttttgactacagtggcaaggat
ttagaagaaaaagagggagaacttcaaggtggagctaaactttctgtaaacagacagttt
tttgatgagcgttggtcaaaacatcgtgttgttacatgcatggattggtcacctcagtat
ccagaacttcttgttgcttcatataataacaatgaagatgttcctcatgagccagatggt
gtagctcttgtgtggaacatgaaatttaaaaaaacgactccagaatatgtcttccattgc
cagtcatctgtgatgtcagcatcctttgcacgatttcatccaaatcttgtagttggagga
acatattctggccagatcgtgctctgggataatcgcagtaacaaaaggacaccagtccaa
agaacaccactctctgctgctgctcacacgcatccagtctactgtgtgaatgttgtgggt
tcccagaatgctcataacctgatcagcgtttctactgatgggaagatctgctcgtggagt
ttggatatgctttctcagccacaggacagcatggagttgatgcacaagcaatctaaagca
gtggctgttacttgtatgtcctttccattgggtgatgtcaacaattttgtggttggtagt
gaggaaggttctatatacacagcgtgccgccatggaagcaaggctggaattagtgagatt
tttgatggtcatcaaggaccgatcacaggtattcattatcacactgcagctggaccagct
gacttctctcatctttttgtcacctcttcctttgactggacagtcaaactttggacaact
aagaataacaaaccattatactcctttgaagataattctgattatgtttacgatgttatg
tggtcaccgacccatcctgccctttttgcttgtgtcgatggaatgggaagacttgatttg
tggaatctcaacaatgacactgaagtgccaactgcaagcattactgttgacagtaatcct
gcactaaatcgtgtgaaatgggctcagactggaagagaaatagctgtaggtgactcagaa
gggcagatattgatttatgatgtaggagagcaaatagcagttcctcgaaatgatgaatgg
acacgatttgctcgaacattggcagaaataaatgcgaacagagctgatgcagaagatgaa
cttgcagcatga
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integrated database retrieval system
