Rhincodon typus (whale shark): 109937243
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Entry
109937243 CDS
T06055
Symbol
poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109937243 (poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109937243 (poc1b)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
109937243 (poc1b)
Cilium and associated proteins [BR:
rtp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
109937243 (poc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_Vps41
eIF2A
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_WDR75_2nd
Cytochrom_D1
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
109937243
NCBI-ProteinID:
XP_048463640
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All DBs
Position
18:46897208..47019633
Genome browser
AA seq
475 aa
AA seq
DB search
MASALEDPNLEHNFKGHKDVVTSVDFNPNNKQLATTSIDKCLMIWNLKPQTRAYRFTGHK
DAVMSVHFSPSGHLVASASRDKTVRLWTPNVKGASTTFTAHSAVVRSVNFSCDGNFLVTA
ADDKSIKVWNTHQQRFLLSFKGHNNWVRSARFSPDGRLVVSCSDDRTVKIWDTVSRECIN
TFTEHRGFANFVDFNPSGTCIASAGTDNTVKLWDIRINKLLQHYQVHSASVNCLSFHPSG
NYLITASSDCTLKIMDLLEGRLLYTLHGHQGPVIAVTFSRHGEYFASGGSDSQVLVWKTN
FDSIPYNHILKGLHVRTNPDPAPHITDIHPRVPHLHTSGPQTIQINPRTHIADMQSSDPP
VVDIGIDFFSKHKSRAAESHCASIITNEVNSSLDPSCQVCSLGMDPASGDPGATSNLEDH
TGIPPTLANTLGHIVQQLDVLTQTVSILEQRLTMTEDKLQECLDNQQTAQQVKSS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgctctggaggatccaaacttagaacacaactttaaaggtcataaagatgtg
gtcaccagtgttgattttaacccaaacaacaagcagctagcgactacctcgattgataag
tgccttatgatatggaacttgaagccgcaaaccagagcctaccgatttacaggacacaag
gacgctgtgatgtctgtccacttttccccctcaggtcatctggtggcatctgcttcacgg
gataaaacggttcgactgtggactccaaatgttaagggagcatcaactacattcacagcc
cacagtgccgtagttcgcagtgtgaatttctcctgtgatggaaatttcctggttacagca
gccgacgacaaatcaataaaggtgtggaacactcatcaacagcggtttctgttatccttt
aaaggacacaataactgggttcgttctgccaggttctctccagatggaagacttgtagtc
tcttgtagtgatgacagaactgttaagatctgggacacagtgagcagagaatgtatcaat
actttcactgagcacagagggtttgccaactttgtggactttaaccccagtggtacctgt
atcgcctcagcaggaactgacaatactgtgaagctttgggatattcgtataaacaaactg
ctacaacattaccaagtccacagtgcttcggtgaactgcttgtctttccatccttctggt
aactatcttatcactgcatctagtgattgtactctcaagataatggatttgttggaggga
agattactttacactcttcatggccaccagggccctgtaattgctgtaacattttctagg
catggagagtattttgcttctggtggaagtgattcacaggtgttggtatggaagacaaat
tttgacagtattccttataaccatattctgaaaggccttcatgtaagaacaaatcctgat
cctgcccctcatataactgatattcacccaagagttcctcatctgcatacttcgggacct
cagacgatacagattaatcccagaacacacatagctgacatgcaatcgtccgatcccccg
gtagtggacattggaatcgactttttctctaaacacaagtcaagagcagcagagtcacac
tgtgcctcaataataacaaacgaggtgaacagttctctggatccttcatgtcaggtatgt
tcccttggaatggacccagccagtggtgaccctggcgcaactagcaatctggaggaccac
acaggcatcccaccaacacttgccaacacattagggcacattgtacagcaactggatgtt
ttaacccagacagtgtcaatcttagaacagcgcttaacgatgaccgaagacaaactccag
gagtgtctagataatcaacagactgcgcagcaagtaaagtcatcctag
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integrated database retrieval system
