Rhincodon typus (whale shark): 109937263
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Entry
109937263 CDS
T06055
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00310
Lysine degradation
rtp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
109937263 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109937263 (prdm2a)
03036 Chromosome and associated proteins [BR:
rtp03036
]
109937263 (prdm2a)
Enzymes [BR:
rtp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
109937263 (prdm2a)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
109937263 (prdm2a)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
109937263 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2HE
zf-C2H2_11
zf-C2H2_ZNF462_1st
Zap1_zf1
zf-C2H2_3rep
Motif
Other DBs
NCBI-GeneID:
109937263
NCBI-ProteinID:
XP_048470983
LinkDB
All DBs
Position
31:complement(23610025..23754883)
Genome browser
AA seq
1527 aa
AA seq
DB search
MEESDPVSAPEIEMLADVPQRVLKGLPQEVTLKPSAVDEKRLGVWATRSIQKGRKYGPFS
GERKKKSQVKNNVYMWEVYFPQFGWMCIDATDPNKGNWLRYVNWARSSDEQNLFPLEINR
AIYYKVFKPIQPGEELLVWYNGEDNPDIAAALEEERSTILNKRSSPRGRKGRKRARRQKF
RSEEGFKRGKTKIASDIVTLEGENTVGSEKDEPCALPAHLPEQRVVIHQIVTQKILPQLK
YPQMSLEPEAMPEENDSIENLPKKKISVKSLKQKSKGDQNGMGDIEETHMFPCKNCERRF
TTKQGLERHQHIHISTEGFTFKCRYCGKAFGTHINMRRHERRHEAGPKKKATLKINAAGQ
LHKDDFDYDKTAIDISVNSSTRLESPVALENYKKTDCEATPQNLENSLVKSCESKIQHPC
KLCKKTFGSYTNLRRHQRRIHERHLLAKGIRMRRKGSPEEQDLTSDQTRSSGFHIASTET
EDEEDEEEEEETDECQAYIMDVSSNISENLNFYIDGKIESNNSTSNCEVIEVDTACTNPF
GLPSVLFPVTDESPQNLKTTQVPVTHTVLKESADSDLKGPKKRRTTSPLPFPKTKTELGI
ETISPVVSSFCGLSLLGQTTNNLSGHQEKNTLSSKLKQLLQIQENSSPRSALFPESSVGP
STSTAPTVGFSRFKRRTSSPPNSPQHSPALSSTGKDTDFIRIWSESLPGLKAPKIESQSS
SPAWSLSSRDETLSPLSLEMCKITTSKEYAPSRLPCTHLPLDLSSGIKLQPNVKTEPEGP
GVTILDLSLHKKLCSDNEVKEDTGSVCTPISCTSRKKKPTTSMLEKVLMNEYNGTDLTTI
NKQDTDCSPQPQLEVEAPPHPDTTPNLVTTPAPSPPPPVLSVPSPLPESVTQVLQSVTPA
LSPVSINVKEEIKDVGYPDTDSEQELNSILPPTIEPESPQDVLIKNSTDNQESAENAQPS
VQEEKSETTFTKSFQCNVCETPFLSIKDLTQHLLVHAEEWPFKCEFCVQLFNEANALSEH
RSSLHGVGKIFVCSVCKKEFAFLCNLQHHQRDLHPDQPCTHIELENGMLRPQNFTDPGKA
TSCPSQSIEESSASPPREVEEEDDDSNDLTEELYTTIKVMASGIKPKGPDVRMGLNQRYP
SFKPPPFQYHNRNSASAVSSAVNFTTHNIPQTFSTAIHCTKCGKSFDNMPALHKHILACA
SASDKKRYTPKKNAIPLKKKVWKKNGAIAAEPARQNTIRRMGQPKRLSFEVETKPKVTMN
KIKMNALKNKKNKLVQRAISQKNRSSAKEKAVLKSRSSESHNCPYCEKEFTYLGSLNKHV
TYSCPKKPASPPSKGSSSHSPASSDKGGGQRRRTADTEIKLQSTPVLLGKRRGRMLGSLQ
AESVSLAPRLQQRMRSVPPVKSKKPSTSPIVSRTTSPVRSVKVSPAEGKRLKSDPRQRSS
ASSGLTSPRLYLRMKNKKVVWQRKTNVMKQKRSEKYMGKTKETRTGAVTRSGAPGVTDSN
DSELEDDQENHGSSSEDVQVYAMKMVR
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaagcgatccagtatctgcacctgaaattgagatgttagctgatgtgcctcaa
cgtgtgttgaagggacttcctcaagaggtgactttaaaaccatcagcggttgatgagaaa
cgcttaggtgtgtgggccacaaggtccattcagaaaggcagaaaatatggtccattctcg
ggagaaaggaagaaaaaatcccaggtcaagaataatgtgtatatgtgggaggtttacttc
ccccaattcgggtggatgtgtattgatgccacagatccaaacaaaggcaactggttgcgg
tacgtgaactgggctcgctcctccgatgagcagaacctcttccctctggagatcaacagg
gctatctactacaaagttttcaagcctatccagccaggggaagaactgttggtgtggtac
aatggggaagacaacccagacattgcagctgctctagaggaagagagaagtactattctg
aacaagaggagctctcccagaggcaggaaaggaaggaaaagagctcgacgacagaaattc
agaagtgaggaaggattcaaaagaggaaaaaccaaaattgcttctgatattgtaacactg
gaaggagaaaacacagtgggttcagagaaggatgaaccttgtgcccttcctgcccattta
ccagaacagagagtagtgattcaccaaatagttacacagaagattctgcctcagctgaag
tatccacaaatgtctcttgagccagaagcaatgccggaagaaaatgattctattgagaat
ctccccaaaaagaaaatttctgtcaaatcgctgaaacagaaatcaaaaggagatcagaat
ggaatgggagatattgaagaaacccacatgtttccatgtaaaaattgtgagcgtaggttt
accacaaaacaaggtctggaacgtcaccagcacatccacatatcaacagaaggattcaca
ttcaaatgccggtattgtggtaaagcctttggcacccatatcaacatgagacgtcatgag
cgacgccatgaggctgggcctaagaagaaggccactttgaaaattaatgcagctggacag
ctccacaaggacgattttgattatgataaaacagcaattgacatcagtgttaattcttca
actcgattggaaagtcctgtagctctggaaaattataagaaaacagattgtgaggcaaca
cctcaaaacctggaaaattctcttgtcaagagctgtgaatcaaaaattcagcacccatgc
aaattgtgcaaaaaaacatttggttcttacacaaacttgcgtcgccaccaacgccgtatc
catgagcgtcacctcttggctaagggtattagaatgagacggaagggctccccagaggag
caagatctgacatcagaccaaaccagatcatctggatttcacattgctagcacagaaact
gaagatgaagaggatgaggaggaagaagaggagactgatgagtgtcaagcatatattatg
gatgtttccagtaacatctctgaaaacttgaatttttacattgatggcaaaattgaatca
aacaacagcaccagtaattgcgaagtgatagaagttgacacagcttgcacaaatccattt
ggactgccttcagtgctttttccagtcactgacgaatctcctcagaaccttaaaacaaca
caagtgccagtaacccacactgttctaaaagaatcagcagacagcgatttgaaaggtccg
aaaaagaggcgaaccacaagccctctaccatttccgaagactaaaacagagttaggcatt
gaaactatatcacctgttgtctcctcattttgtggtctgtctcttcttggtcagaccact
aacaatttaagtgggcatcaggagaagaataccttatcctcaaagcttaagcagcttctt
cagatacaggaaaacagttcacccaggtcagctctgtttccagaaagctcagttggtcct
tcaacatcaacggcacccacagtgggatttagtcgattcaagagaagaacaagttcacca
ccaaattctccacagcatagtccagcattgagcagcactggaaaagacactgactttata
aggatatggagtgaaagtttacctggcctaaaagcaccaaaaattgaaagccagagtagc
tcacctgcctggagtctgtccagccgagatgaaactctcagcccgttgagtcttgaaatg
tgcaaaataacaacttctaaagaatatgcaccaagccggcttccctgcacccacctgcct
ctagatctatccagtggcatcaaactacaacccaatgtaaaaacggaaccggaagggcct
ggggtaactatcttagacttgagtttgcataaaaaattgtgcagtgacaatgaagtcaaa
gaggatacagggagtgtttgtactccaatctcatgcaccagtagaaagaagaaacctaca
acctctatgttagagaaggtacttatgaatgaatacaatggcacagatctaacaacgatc
aataaacaagatacagactgcagtccacagccacaactagaggtagaggcaccacctcat
cctgacacaaccccaaatctggtcacaacgcctgctccttctcctccacctcccgtcctt
tctgtaccttcacctcttccagagtcagtcacccaagttttacagtcagtaacgcctgct
ttgtcaccagttagcataaatgttaaggaagaaattaaagacgttggctatccagacacg
gatagtgaacaagaattgaacagtatccttccacccacaattgaaccagaatcgccccaa
gacgtactcatcaaaaactctactgataatcaggagagtgcagaaaatgctcagccttca
gtacaagaggagaaatctgaaacaacatttaccaaaagctttcagtgcaatgtctgtgaa
actcctttcctttccatcaaggatctaacccaacatttgttggttcatgctgaagaatgg
cccttcaaatgtgagttttgtgtgcagcttttcaatgaagccaatgcattgtctgagcac
cggtcgtctttgcatggcgtaggcaagattttcgtatgctctgtctgcaaaaaagagttt
gcattcctttgcaatttacagcatcatcagcgtgatctgcatcctgaccagccatgcaca
cacatagagctggaaaatggaatgctgaggcctcaaaatttcaccgatccaggcaaagcc
accagctgtccaagccagtcaatagaagaaagttctgcatcaccacctcgtgaggtggag
gaagaagatgatgattccaatgatctaacagaggaactgtatactacaataaaagtaatg
gcatctgggataaagccaaaaggccctgatgtccgtatgggtctcaatcaacgctatcct
agctttaagcctcctccatttcaataccataaccgtaattctgccagtgcagtgtcatcg
gctgtaaattttactacacacaatattcctcagaccttcagtacagccatccactgtaca
aaatgtggcaagagctttgataacatgccagcattgcacaaacatatcctggcttgtgca
tctgccagtgacaagaaacgctacaccccaaagaaaaatgcaatcccactgaaaaagaaa
gtgtggaagaaaaacggggcaattgctgcagagccagccaggcaaaacaccatccggaga
atggggcagccaaaacgactcagttttgaagtagagactaagccaaaagtgaccatgaac
aagatcaaaatgaatgctctgaagaataaaaagaacaaattggtgcaaagggcaatctca
cagaagaaccgctcatctgccaaggagaaggcagtattgaaaagcaggagttcagaaagc
cacaattgtccttactgtgagaaagaatttacttacctaggaagcctcaacaaacatgtt
acctacagttgccccaagaaaccagcatcccctccttcaaaagggtctagttcccactcc
cctgccagcagtgacaaaggaggtggccaacgtagaaggacagcggacactgaaatcaag
ctgcaaagtacgccagttcttttaggaaaaaggagaggtagaatgctgggatctttgcaa
gccgagtctgtttccttagcaccaaggttgcagcagcgaatgagatctgtacctccagta
aaatcaaagaagccaagcacatcacctattgtctccagaactacaagcccagtaagatca
gtgaaagtgtcaccagcagagggaaagcggttaaaatctgatcccaggcaacggtcttct
gccagctctggcttgacttcaccaaggctatatctccgaatgaagaataaaaaagttgtt
tggcagaggaaaacaaatgtaatgaagcaaaaaagatcagagaagtacatggggaaaaca
aaggaaactcgaacaggtgctgttacacgaagtggggctcctggagtcactgatagcaat
gatagtgagttggaagatgaccaggagaaccatggatcatcttcagaagatgttcaggtt
tatgcaatgaaaatggtgaggtaa
DBGET
integrated database retrieval system
