Rhincodon typus (whale shark): 109937343
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Entry
109937343 CDS
T06055
Name
(RefSeq) decorin-like isoform X1
KO
K04660
decorin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04350
TGF-beta signaling pathway
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109937343
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109937343
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109937343
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
109937343
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRR_9
LRRNT
LRR_5
LRR_14
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
109937343
NCBI-ProteinID:
XP_048467977
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Position
25:14136698..14276943
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AA seq
381 aa
AA seq
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MRLSLGTKQSNGYWIYKTCSVTMSGAIQVFISCLVAFMLCQAKPFKQSSFFDFVGEEQGS
AVGPTPEIPVIYQYKCPPRCRCHMSVVQCSNLGLAKVPAYILPETTVLDLQNNKIRELKE
NDFKYLKNLQILILVNNRLQRIHPKAFSSLHSLRRLYLSKNLISSVPENMPKSLLELHIC
DNKINFVKKKPFDGMSNMFALELSRNPLMPKGIAKGAFQGLKTLSYLRITETGLSEIPKD
LPSSISEMHLDRNRILKVEVDDFTNLSTLVRLRLSSNKIRYFANTTLSHMPNLQDLHLDN
NRLFAIPPGLSEHKNIMALYLNDNQIAHIRGGDFCPKVDDPLKSPYSRISLYGNPIPYWE
IEPGVFRCALDWMFIQLERPN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttccctgggaacaaagcaatcaaatggctactggatctacaagacatgttca
gttaccatgagtggagctattcaggtcttcatatcctgtctcgtggctttcatgctctgc
caggcaaaacccttcaaacagtccagtttctttgacttcgttggagaggaacaaggatct
gcagttggaccaactcctgagatccctgtcatctatcaatacaaatgtccgcccaggtgt
cgctgtcacatgagcgtggtgcagtgttctaatttaggtcttgccaaagtacctgcatat
atcctacctgagactactgtgctggatcttcagaataacaagatcagggagctaaaggaa
aatgacttcaaatatctgaagaaccttcagattttaattcttgtgaacaacaggctgcag
aggatccatcccaaggccttttcctcacttcacagtcttagaaggctatatctttccaag
aatctaatcagtagcgttccagagaacatgccaaagagcctccttgaactccacatatgt
gacaacaaaataaactttgtgaaaaagaaaccttttgatggaatgtccaacatgttcgcc
ctcgaattgagtagaaatccactcatgccaaaaggaattgcgaaaggagcctttcaaggg
ttgaaaactttgtcatatctccggattactgagacagggctttctgaaattccaaaagac
ctgccaagttcaatatctgagatgcatcttgaccgcaatagaattctcaaagtggaagtg
gatgatttcacaaacctcagcactttggtcaggttgaggctgagttccaacaaaatcaga
tattttgcaaatacaactctcagccacatgccgaatctccaggatctccacttggacaac
aatagattgtttgccattcctccgggcctgtcagaacacaagaacatcatggctttgtat
ctcaatgacaaccagatagctcatataagaggtggtgacttttgtcccaaggtggatgat
ccattgaaaagcccatacagtcggatcagcctatatggaaaccctattccatactgggaa
attgagcctggagtcttccgctgtgctttggactggatgttcatccaactggagcgaccc
aactaa
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