Rhincodon typus (whale shark): 109937400
Help
Entry
109937400 CDS
T06055
Symbol
nsun4
Name
(RefSeq) 5-methylcytosine rRNA methyltransferase NSUN4
KO
K21970
5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109937400 (nsun4)
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109937400 (nsun4)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Other ribosome biogenesis factors
109937400 (nsun4)
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
109937400 (nsun4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
Motif
Other DBs
NCBI-GeneID:
109937400
NCBI-ProteinID:
XP_020391567
LinkDB
All DBs
Position
10:54911187..54922841
Genome browser
AA seq
420 aa
AA seq
DB search
MASLRRSNCPLQLLIGKLREWQRLERRYIYKKKWASSQPRVPSTQLALQSMDMNYSLQFG
DLWPSIRLALLCEQKYAALLNGFGDVEKVIQEFEERVQARDFVYEGQSQWPNWTSQTDSQ
PEAIQDFPAPGSSDLEPPEFSDDCTAQRSPPIPDMKQPLRISPNLKCFTFPRGDTTRFKP
ARPDGLRLLEYYLMDAASLLPVLTLDVQPGHAVLDLCAAPGGKSLALLQTECCRHLAIND
ISISRLNRLHKILHSYVPKNLRTEDRLRITSFDGRHWGEIERNTFDRVLVDVPCTTDRHS
VLEEDNNIFSRLRLKERQKLPLLQTQLLLSGILATKPGGSIVYSTCSLSQLQNEYVVERA
VELAETEHNVELCLVDLSAIRTLYRNTFNFYSHCRVGELVLPHLTANYGPMYFCKLHRIH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgttgaggcgatcaaattgtcccctgcaacttttaatcgggaaactgagggaa
tggcagagactagagcggcggtacatttacaagaagaaatgggcttcatcccagcccagg
gtccccagtactcagctggctttgcagagcatggacatgaactacagcctgcagtttggg
gacctatggccctccatccgcctcgctctactctgcgagcagaaatatgcagctcttctt
aacggcttcggggatgtggagaaagtgatccaggagtttgaggagcgggtgcaggccaga
gacttcgtgtacgagggtcagagtcagtggccgaactggacatcacaaacagactctcaa
ccggaggcaatccaggattttccagctcctgggtcttctgatctagagcccccagagttc
agcgatgactgcacggctcaacgatcgccacccatcccggatatgaagcagcccttacgc
attagcccaaacctcaaatgtttcacatttccaaggggagacaccacacgttttaagcct
gccagaccagatggcttaagattgttggaatattatctgatggatgctgcatcgcttctc
ccagtactcactctagatgttcagccaggtcatgcagttcttgacctctgtgcagcgcct
ggtggaaagtctcttgcactattgcagacagaatgctgtcgacatctcgctatcaatgat
atatctatatctcggttaaacaggctacataaaattcttcatagctatgtcccaaagaat
ctccgtacagaggacaggctacggatcacatcatttgatggcagacactggggagagata
gagaggaatacttttgaccgggtgttagttgatgttccctgtacaactgacagacactca
gtacttgaggaagacaataatatctttagtcgactacggcttaaagaacggcagaagctt
cctttattgcagacccagttattgctctctggcattcttgccacaaagcccggaggatca
attgtttattcaacatgcagcctgtcccagttacaaaatgagtacgtggtagagagagca
gttgagctagcagagacggaacataatgtggagttgtgtctggtggacctatctgctata
cgcaccctttacagaaacacatttaatttctatagccattgtcgagtcggggaacttgta
ctcccacatctcactgcaaactatggaccaatgtatttttgtaaactgcacagaatacac
taa
DBGET
integrated database retrieval system
