Rhincodon typus (whale shark): 109937536
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Entry
109937536 CDS
T06055
Symbol
fhod1
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109937536 (fhod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109937536 (fhod1)
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
109937536 (fhod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
Drf_FH3
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
109937536
NCBI-ProteinID:
XP_048461551
LinkDB
All DBs
Position
15:complement(47846903..48145266)
Genome browser
AA seq
1355 aa
AA seq
DB search
MATITCRVQYLDDMDPFVCTNFPEPRRPPTYNFYETIPLIEQVTAVHKLLDSPLKLEDCV
LQIAPNGNYLDLELSLDEQKDDLEGFYEEVGKGRRPTIILRTQLSVRVHAIIEKLYNSTG
PDLRRSLFSLKQLFQDDKDLVPEFVNAEGLTCLIKVGAEADQNYQNYILRALSQIMLFVD
GMNGVIGHNETVQWLYSLTGSMYRLVVKTALKLLLVFVEYTENNAALLIQAVNTVDDKRG
TKTWTNLVEILEEKNGADSELLVFTMTLINKTLGALPDQDSFYDVTDCLEQQGLEKIIQR
HMSNKGTDPDVKQQFTIYENALKHEDGEDDGQMPNARRDRRKLTPNGDDGRKNRRSFGQN
MAEIATSPVPATAHSPTPGKVSPSTPTQFDVKSSKVISIQSAQAAAQSHSATPSPTPVTP
TCDLNSPSTNQVKSSTDLPPRKLYSSFSKPDLLNTPSEEKTMKTGPGEKSIFKAEKVAVS
DKPVLRKYENRFLENLVATQRERDLSKSRFSRDFASIPTDRPPDVEALSEKEQQNEALNE
REPCSASSSSSTSSTLEREERADRQAGNNETGRCIIRQSSLDQCSAISNDKKFMLDMLYA
KAKGNNLQLTKEESPTESERRVTEKASVESTESLIKRFSRQASHQIEDSDKKPNIESIPG
NVKSTLEKFAEPQVKALKEQFSIEAELNEKNVEKTSIMKKDSEHMWDQLEASPRVLKIKD
LDFTDLREEEDIDVLDIDSCVTKATAQQDLSGSPGSSMVPSALPPPPPPLLGGPPPPPPP
PPPPGGPPPPPPPPPPFAQPSGPPLPPPPPPTNVSPSQGANSTLTMKRKTVKLFWKELKQ
PEGPSRSCKFGRGTVWASLDKVTVDTTKLEHLFESKAKELPTKKGGDAKRQGLVVLDPKR
SNAINIGLTVLPPVHIIKNAILNFDEYAINKEGIEKILTMVPTEEEKQKIQEVQLANPDI
HLGTAEQFLLTLSSINGITARLQLWAFKLDYELMEKEIAEPLFDLKHGMEQLAKNKTFKC
LLATLLAIGNFLNNSSAKGFELSYLEKVSEVKDTLQRQSLLYHMCNLVVEKFPDTTDVYS
EIAAITRSAKVDFDQLAESLVQLERKCKASWDHLKVIAKHETKPVLKNKMTEFLKDSTER
IIILKVVHRRIINRFHSFLLYLGHPSNSARELKITRFCKIISEFALEYRTTRERVLQQKQ
KRAAYRERNKTRGKMITETAKFSTAAGSTESSPAPETPDHQLQADEEHENMKNILSVSEP
QTRRSRGNRSIGRVSPPHPSVPKDEVATPPDDATDEIMDRLVKSVTQNPNQRPSTPKERK
RSRANRKSLRRTLKSGLTPDVVQALGLSKAPEVEV
NT seq
4068 nt
NT seq
+upstream
nt +downstream
nt
atggcgactataacgtgcagagtgcaatatctggatgacatggacccattcgtttgcacc
aacttccccgagcccaggagaccgccgacttacaacttttacgagaccatccctttaata
gagcaagtgacggcagttcataagctgctggactccccgctgaagttggaagactgtgtg
ctacagatagctccgaatgggaattatttggatctggagttgtcactggatgagcagaag
gatgacctggaaggattctatgaagaagttggtaaagggagacgacctaccataatcctt
cggacccagctttctgtaagagttcatgccattatagaaaagctgtacaactcaacaggc
cctgatttaagaagatcacttttctctttgaagcaactattccaggatgacaaagacctg
gtgcctgagtttgtaaatgctgaaggattgacgtgtctaatcaaagtgggagctgaggct
gaccagaactaccagaactacatcctgcgagctttgagccagataatgctgtttgtggat
ggaatgaatggcgtcatcggtcataatgagacagtacagtggctgtactcactaactggc
agcatgtaccgtttggtggtgaagactgctctgaaactcctgttggtgtttgtggaatac
acagagaacaacgcagctcttctcatccaggctgtcaacaccgtggacgataaaagaggc
acaaagacatggacgaatttagttgaaattctggaggagaagaatggggctgattctgag
ctgcttgtcttcactatgacactcattaacaagaccctgggagcccttccagaccaggat
tcattctatgatgttacagactgtcttgagcaacaggggctagaaaaaatcattcaacgg
cacatgagtaacaaaggaactgacccagacgtaaagcaacagtttaccatttacgagaat
gcactgaagcacgaagatggtgaagatgacggacagatgccaaatgcacgtagagaccgg
aggaagctgaccccaaatggggacgatggacggaaaaataggcggtcatttggacaaaac
atggctgagatagcaaccagcccagtaccagcaacagcacacagcccaacgccaggaaaa
gtgagtccaagcactcctacacagttcgatgtaaagagttcaaaggtgatttctattcag
tccgcacaagcagctgcccaaagccattctgcgacaccttcacccacaccagtaactcct
acatgtgacttaaattcaccgtctacaaaccaagtgaaatcttcaacagaccttccaccc
agaaaattgtattcatcgtttagcaagccagatctgctaaacacaccttcagaggagaag
acaatgaaaacaggtcctggagaaaaaagcattttcaaggctgaaaaagttgctgttagt
gataaacctgttctgagaaagtatgaaaatcgctttttagaaaatcttgttgcaacacaa
agagagagggatttaagcaagtcgcgtttttccagagactttgcctccatacccacagac
agacctcctgatgttgaagcgcttagtgaaaaggagcaacagaatgaagcattaaacgag
agggagccatgttcagcctccagcagttcatcaaccagcagcacattggagagggaagag
agggcagacagacaggcgggcaataatgagacaggtcgatgcatcatccgccaatccagc
ctggatcagtgcagtgccatctccaatgacaagaaattcatgctcgacatgctttatgct
aaagccaagggcaataaccttcagctcaccaaggaagagagtcctactgaaagtgagagg
cgagtcactgaaaaggcttcggtggaatctaccgagagtctaatcaaacgcttttccagg
caggccagccatcagattgaggacagcgataagaagcccaacattgaaagcatccccggg
aatgtaaaatccacgctggagaaatttgcagaacctcaggttaaggctttgaaggaacag
ttcagcattgaggctgaacttaatgagaagaatgtggagaaaacatccattatgaagaag
gactctgagcacatgtgggaccaactggaagcgagtcctagagtgctcaaaatcaaagat
ttagatttcacagatctccgtgaggaggaggacatcgatgtgctagatatagactcgtgc
gtgaccaaggcaactgctcaacaggatctttctggatcacctgggagttcaatggttccg
tcggcgctgccgccacctccccctcccctgcttggaggtccacctcctccccctccccca
cccccaccgcctggaggtcctcctcccccacccccaccgccaccaccttttgcacagcca
tctggcccccctctacctccccctcctccacccactaatgtatccccttcacagggagcg
aactctacattaacaatgaagagaaagactgtcaagctcttctggaaggaactgaagcag
cccgaaggcccctccaggagctgtaaatttggccggggcactgtctgggcttccttagat
aaagtgacagtggacaccactaagttggaacatctgtttgaatccaaagctaaggagtta
ccaacgaagaaaggaggagatgccaaaaggcaaggattagtcgtactggatccaaagagg
agtaatgcaattaacattgggctcacagtattaccaccagttcatatcatcaaaaatgcc
atcctcaactttgatgaatatgcaataaacaaggaaggtattgagaaaatattgaccatg
gtgcccacagaagaggagaaacagaagatccaagaagtccagttggcgaatcctgatatt
catctgggaacagcagaacaattccttttaaccttgtcatcgatcaatgggattacagcc
aggcttcagctctgggctttcaagctggactatgagctaatggaaaaggaaattgcggag
ccgctgtttgacttgaagcatggaatggagcaacttgcaaagaataaaacctttaagtgc
cttttggcaactctacttgcgattggaaattttctgaacaattccagtgccaaaggattc
gagctgagttatctggagaaagtgtctgaggtgaaggatacacttcagaggcaatctttg
ctgtatcatatgtgtaaccttgtggtggagaaattcccagacacaacagatgtgtattcc
gagattgcagcaatcacaagatctgctaaagttgactttgatcagttggcagaaagcctt
gttcagctggaaagaaaatgcaaagcttcatgggatcacctgaaggtcatagctaagcat
gaaaccaaacccgttctaaaaaacaaaatgactgaatttctgaaggacagcacagaaagg
attataatcctcaaagtggtacaccgtcggattataaacaggttccattctttcctgctg
tacctgggccatccttccaactctgcccgagagctgaagattaccaggttctgtaaaata
attagtgagtttgcactagaatatcggaccaccagagaacgggtcctgcagcagaaacag
aagagggctgcatatcgagagaggaacaagacaagggggaaaatgatcacagagactgca
aagttctccacagcagctggtagcactgagagtagcccagcccctgaaacgccagatcac
cagctacaagcagatgaggagcatgagaacatgaagaatattttgtcagtttcagaacca
cagactcgaaggagcagaggcaacagatctataggaagggtcagtccgcctcatccttct
gttcctaaagatgaagtagcgactccacctgatgatgctactgatgaaattatggaccgc
ctggtcaaatcggtcactcagaatcccaaccagaggccatctaccccaaaggaacgcaag
aggtcacgagcaaataggaaatctttacggcgaaccctgaagagtggtctgaccccggac
gtggtccaagccttgggtttgtccaaagccccagaagtggaagtataa
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