Rhincodon typus (whale shark): 109937602
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Entry
109937602 CDS
T06055
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109937602 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109937602 (nelfcd)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
109937602 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
109937602
NCBI-ProteinID:
XP_020391692
LinkDB
All DBs
Position
19:52228289..52300753
Genome browser
AA seq
580 aa
AA seq
DB search
MSEEYYGSAADWEEQDGSMHDEDEGDGEDDAEVQQECLQKFSSRDYIMEPPIFNTLKRYF
QAGGSPEHVIQMLSENYTAVAQTVNLLAEWLIQTGVEPSHVQETVENHLKNLLIKHFDPR
KADSIFTEEGETPAWLEQMIAHVTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITS
VSTACQQLEVFSRVLRTSLATLIDGGEEHLEKNLPEFAKMVCHGEHTYLYAQSVMSVLAQ
EEQGGAAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNPADI
TVLYKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGSKINPEHKHKYIYILAYAASVVESW
KKNKRFNINKDELKSTSKAIETVHNLCCNENKGASELVAELGTLYQCIRFPVVAMGVLKW
VDWTVSEPSYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQL
ELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTSDFV
HLFLPILENDSIVGTIKTEGECDAVAEFIAHCKSNFIMMN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggaatattacggcagtgctgcggactgggaggagcaggacggctctatgcac
gatgaggatgagggagatggtgaggatgatgcagaggtgcagcaggaatgcctgcaaaaa
ttttccagccgagattacataatggagccacctatattcaacacgctaaaaagatatttc
caggcagggggttctccggaacatgtgatccagatgctttctgagaattatacagcagta
gcacagactgtaaacctgttggcagagtggctgattcagacaggggttgagccatcacat
gttcaagagactgttgaaaatcatttgaaaaatttgctgatcaaacactttgatcctcgg
aaagctgattccatattcacagaggaaggagagaccccagcctggttggagcagatgatt
gctcatgtgacttggagagacctcttctacaaactagcagaagctcaccctgactgtttg
atgctgaactttactgttaagctgatctcagatgctggatatcagggtgaaataaccagt
gtgtcgacagcctgtcagcagttggaagttttttcccgtgttctccgcacctcgcttgcc
acgcttattgatgggggtgaagaacatctagagaaaaacctgcctgagtttgcaaaaatg
gtatgtcatggagagcatacatacctgtatgctcagtctgtaatgtctgtcttggcccag
gaggaacaaggtggagcagctgtccgacgaattgcgcaggaagttcagagatatgcacat
gagaaaggtcatgatgccagccagatcaccttagcgctgggcactgctgcatcctacccc
cgagcctgccaggcactgggtgccatgctgtctaagggagctctgaatcctgctgacatc
actgtcttatacaaaatgttcacgagtatggatccacctcctgtggaactgatcagagtc
cctgccttcctggatcttttcatgcaatccctcttcaaaccaggctctaaaatcaaccct
gagcataaacacaagtacatctacatcctggcctatgcagccagtgtggtggagtcatgg
aaaaagaacaaaagatttaacatcaacaaagatgagctgaaatcaacatcgaaggccatc
gaaacagttcacaatttatgctgcaatgaaaacaaaggggcttcagagttagttgcagaa
ctgggaaccctctaccaatgtattcggttcccagtggtagcaatgggagtgctgaaatgg
gttgactggactgtatcagagcccagctactttcagttgcagactgaccatacacctgtt
cacctagcgctgctggatgagatcagtacctgtcaccagctcctccatccccaagtgctg
cagctccttgtgaaactgtttgagaccgaacattcccagcttgatgtcatggagcagctg
gagttgaagaagacactgctggacaggatggtccacctgttgagtcgcggctatgtcctt
cctgtggtcagctacattcgcaagtgtttggagaaattggacacagatatctcactcatc
agatactttgtcacagaggtcctggatgtcattgctcctccatacacatcagactttgtc
cacctttttctcccaatcttggagaatgacagcattgttggcacaataaaaacagaaggg
gagtgtgatgctgtggcagagttcattgcacactgcaaatccaatttcatcatgatgaac
tag
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