Rhincodon typus (whale shark): 109937622
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Entry
109937622 CDS
T06055
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109937622 (tcea3)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109937622 (tcea3)
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
DBD_Tnp_Mut
Motif
Other DBs
NCBI-GeneID:
109937622
NCBI-ProteinID:
XP_048469001
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All DBs
Position
27:17420940..17461654
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AA seq
399 aa
AA seq
DB search
MGREENLTRIAKKLDKMVSRKSMDGALDLLQELQGVKMTLKLLQNTRVGMSVNAIRKHST
DEQVIALAKILIKNWKKLLASEIPASIKTEKTSGKEGEKKDQAPAVSPAPQNHPKDKYVE
RQDLFSSKSSPTTSPVSRKNSTDGQRDHHRGDFLSSMSPMTLSPMPRKNSTDTEERKDSY
NSKSPTTASPARRTSVDNLKEESGGSSKAKMESPSTPTSPTFSTPTILPPFLSTGESIRD
KCIEMLIAALKTDDDYKDYGVNCDKMGAEIEDYIYQEFQKTDMKYKNRVRSRISNLKDPK
NPNLRRNVLAGAIDLLHLARMTAEEMASDELKELRNVITREAIREHQMAKTGGTHSTLFQ
CGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagaggagaacctcaccagaattgcaaaaaagctggataaaatggtatcgagg
aagagtatggatggtgctctggatctgctccaggaactgcaaggcgtgaagatgactctg
aagttgttgcagaatacaagagttgggatgtctgtaaatgcaatccgtaaacacagcacg
gatgaacaagtcattgcattagctaaaatcctcatcaaaaactggaaaaagcttcttgcc
tcagaaattccagcctctatcaagactgagaaaacatcaggaaaagagggtgagaagaaa
gaccaggcaccagcagtgtccccggcaccccagaaccatcccaaagataaatatgtggag
aggcaagatttattcagctccaaatcctcaccgacaacttctcccgtgtccaggaagaac
tcgacagatggacaacgggaccatcacaggggtgatttcttgagctctatgtcaccaatg
actctttcacctatgcccaggaaaaactccacagatactgaagaaaggaaggattcgtac
aacagcaaatcaccaacaacagcctcaccagctcgaagaacttcagtggataatttgaaa
gaagaaagtggaggtagcagcaaagcaaagatggaatcaccttccacacctaccagccct
accttctccacaccaactatcctccctcctttcttgtcaactggggagtccatccgtgac
aaatgtatagagatgttaattgcagctttgaagactgatgatgattacaaagactatggt
gtgaactgtgacaagatgggtgctgaaattgaagattatatctaccaggagtttcagaaa
acagacatgaaatacaaaaaccgtgttcgaagcagaataagtaatctgaaggacccaaag
aaccctaacttgagaaggaacgtgttggctggtgcgatcgacttgctccatctggcgagg
atgactgcagaggagatggccagtgatgagttgaaggagcttcgcaatgtgataaccaga
gaagctatcagggaacatcaaatggcaaagacgggtggaactcattctactctttttcaa
tgtggaaaatgcaagaagaaaaattgcacctataatcaggttcagacccgcagtgctgat
gaaccaatgaccaccttcgtcctgtgtaatgaatgcggaaaccgctggaagttctgctga
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