Rhincodon typus (whale shark): 109937645
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Entry
109937645 CDS
T06055
Symbol
paf1
Name
(RefSeq) RNA polymerase II-associated factor 1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109937645 (paf1)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
109937645 (paf1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
109937645
NCBI-ProteinID:
XP_048474193
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All DBs
Position
39:14153715..14182527
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AA seq
516 aa
AA seq
DB search
MFAASLVLSRSGVVCRVKYCNSLPDIPFDPKFVTYPFDPNRFVQYKATSLEKQHKHELLT
EPDLGVVIDLINPDTYRIDNNVILDIADEKLLEEEIQAPSSSKRSQQHAKVVPWMRKTEY
ISTEFNRYGISNEKPEVKIGVSVKQQFTEEEIYKDRDSQIAAIEKTFVDANKEVTQHYSK
PRVTPVEVMPVFPDFKMWINPCAQVIFDSDPAPKEITGPGAVEMMSQAMIRGMMDEEGNQ
FVAYFLPNEETIRKRKRDNEECIDYMPEDIYEYKISREYNWNVKNKASKGYEENYFFIFR
DGDGVYYNELETRVRLSKRRAKGGHGVQSNTNAVLVVKHRDMNEKELEAQEARRAQLENH
EPEDEEEMEQGTEIPGSEDEKERESGSEKADSADEHSGSESEREEDKEEKASNKSGSDME
SNSGDERQAREARDEEEIFGSDDDSDNEDQQNESGQEESGSDDEQHSEEEERRSRSRSAS
NSGSEQSDNENQHVVQSGSEQGTDSSENEGSGSESD
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctgcttctcttgtcctttctaggtccggagtggtgtgcagggtgaagtattgc
aactctctaccagacattccctttgacccaaagtttgtgacgtatccgtttgatcccaac
agatttgtacagtataaagctacttctcttgagaaacagcacaaacacgagttgttaaca
gaaccagatctgggagttgtgattgacctcatcaaccccgatacataccggattgataac
aatgtcattcttgatattgcagatgagaagctacttgaagaagaaattcaggcaccatcg
agttcaaaacgttcacagcaacatgcaaaggtggtgccgtggatgagaaaaactgaatac
atctccacagaattcaaccgatatggcatctccaacgagaagccagaagtcaaaatcggt
gtgtctgtcaagcagcagttcacagaggaggagatttacaaagacagagacagccagatc
gcagcgattgaaaagacattcgtggatgcgaataaagaggttactcaacattacagcaag
cctcgggttacccctgtggaagtcatgcctgtatttcctgattttaagatgtggattaac
ccatgtgcacaggtcatattcgactctgacccagcacccaaagagatcactggtccaggt
gctgtggagatgatgtcccaagctatgatcagaggtatgatggatgaggaaggaaaccaa
tttgttgcttacttcctgccaaatgaggaaaccataaggaaacggaaaagagataatgag
gaatgcattgactacatgccagaggatatatatgaatataaaatatctagagagtataac
tggaatgtgaagaacaaagccagtaaaggatatgaggaaaactatttctttatcttccga
gatggagatggagtttactacaacgaacttgagaccagagtacgtctgagcaagcggcgt
gcaaagggaggtcatggagttcagtcgaacaccaatgcagtgctcgtggtaaagcacaga
gacatgaatgagaaggagctggaggcacaggaagccagacgggctcaactggagaatcac
gagccagaggatgaagaggaaatggaacaaggaacagagatcccaggatcagaagatgaa
aaagagagagagagtggcagtgagaaggcagacagtgcggacgagcactctgggagtgaa
agtgaacgggaagaggacaaagaggagaaagccagcaacaagagcgggagtgacatggaa
agtaatagtggggacgagcggcaggctcgcgaggcccgggacgaggaggagatcttcggc
agtgatgacgacagtgacaatgaggaccaacagaacgagagcggccaagaggagagtggc
agtgacgatgagcagcacagcgaggaggaagagcgcaggagccgcagcaggagtgcatcc
aacagcggcagtgagcagtctgacaatgagaaccaacatgttgtgcagagtggcagtgag
cagggtacggattcaagtgaaaatgagggaagtggcagtgagagtgactga
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integrated database retrieval system
