Rhincodon typus (whale shark): 109937727
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Entry
109937727 CDS
T06055
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109937727
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109937727
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
109937727
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
SH3_9
Ank
BAR
SH3_2
SH3_1
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
109937727
NCBI-ProteinID:
XP_048451718
LinkDB
All DBs
Position
4:complement(47676861..47992313)
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AA seq
1056 aa
AA seq
DB search
MEPTLDLDKNALQKVKKSAKSINTSGQEHVQNEENYAQALDKFGSNFLSRDNPDLGTAFV
KFSTLTKELSTLLKNLLQNLSHNVIFTLDSLLKGDLKDVKGDLKKPFDKAWKDYETKFAK
IEKEKREHAKQHGMIRTEITGAEIAEEMEKERRVFQLQMCEYLIKVNEIKTKKGVDLLQN
LIKYYHAQCNFFQDGLKTADKLKQYIEKLAADLYNIKQTQDEEKKQLCTLRDMLKSSLQL
EQKEDSQSRQSGYSMHQLQGNKEYGSEKKGYLMKKSDGLRKVWQRRKCTVKNGYLTISHA
TTNRQPARLNLLTCQVKPTADEKKCFDLISHNRTYHFQADDEQECLVWISVLTNSKEEAL
NMAFRGEQSSGENSIEDLTKAIIEDVQRMPGNDVCCDCGAPDPTWLSTNLGILTCIECSG
IHREMGVHISRIQSLELDKLGTSELLLAKNVGNISFNEILEANLPQPSPKPIPHSDMTAR
KEYIHAKYVDHKFAKRLCTSSLAKMNELLESVKSRDLLALIQVYAEGVELMESLPDLGQE
PGETVLHLAVRTADRTSLHLVDFLVQNSGNLDKPTAKGNTAVHYCCMFDKVECLKLLLRG
KPSLNLVNQGGETALDIARRLQRLQCEELISQATLGKINPHVHVEYEWQLRQEEIDESDD
DLDVKTSPVKKERSPRPQSCCHSSSLSPQDKLMIPGLGIAREKQRLSYGAFSNQIYGSGT
DSPTSPATDAPPLPPRNPSKAPHGPVPPSVLPVGPQVTTGSSTLSKKRPPPPPPGHKRTL
SDPPSPLPHGPQNKGLIPWGTDTGPPQSNRTGNKFEGLPQQSSTGTGTTKTALGPRVLPK
LPQKVSLRKIDSIHHSSVDKSSPDTFQKPHPGDLTQKSYVEELPQKPHPGDLPQKPHPGD
LPQKPHPGDLPQKPKDLPPKPQPGEIPQKPHIGEVIQKSQPGEVSQKPQAQEISPKPQSR
DMLQKQPSEDANGTSPSLPETPVPLPRKINTAKNKIRRVKTIYDCQADNDDELTFIEGEV
IVVTGEEDQEWWIGYIEGQPDRSGVFPVSFVHILSD
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgactttagatttggataaaaatgcactacaaaaggtaaagaaatcagcaaaa
tcaataaacacttctggtcaagaacatgtgcaaaatgaagagaactatgcacaagcacta
gataaatttggtagtaattttttaagtcgtgataatcctgatcttggcacagcttttgtt
aaattttccacactcacaaaggagctttcaacattgctgaaaaacttgctgcagaatctt
agtcataatgtcatcttcactttggattcactattgaagggagatctgaaagatgtcaag
ggggacttgaagaaaccttttgacaaggcatggaaggattatgaaacaaaatttgctaaa
attgaaaaagagaaacgggagcatgcaaagcagcatgggatgattcggactgaaattaca
ggagctgaaatagcagaagaaatggaaaaggagcgacgggtctttcagctccagatgtgc
gagtatctcattaaagtgaatgaaatcaagacaaagaagggtgtggatctgctccaaaat
ctcatcaaatattaccatgcacaatgcaatttttttcaggatggcttaaaaacagcagat
aaactgaaacagtatattgagaaactggctgctgatttatacaatatcaagcaaacacag
gatgaggaaaagaagcagctgtgtactctccgtgatatgctcaaatcctcactgcaactt
gaacagaaagaagattctcaaagtagacaatcgggatacagtatgcaccagcttcaaggc
aataaggaatatggcagtgagaagaagggatatctcatgaaaaaaagtgatggtcttcga
aaagtatggcagagaagaaagtgcacagtaaagaatggctacttgacaatatcccatgca
actaccaacagacaaccagcaagactgaatctactcacttgccaggtgaaacccactgca
gatgagaagaagtgttttgacttgatatcacacaacagaacctatcacttccaagcagat
gatgaacaggaatgtctagtatggatatcagtattaacgaacagtaaagaagaggcatta
aacatggcattcagaggagagcaaagcagtggagagaacagcatagaggacctaaccaaa
gccatcattgaagatgtgcagcggatgcctggcaatgatgtctgttgtgattgtggagct
ccagatcctacttggctgtcaaccaacctaggaattttgacatgtatagaatgttctgga
atacacagagaaatgggagtgcatatttctagaatacagtccctagaactggataaatta
ggaacctctgaactcttgctggccaagaatgtaggaaatatcagtttcaatgaaattctg
gaagccaacctaccgcaaccatcaccaaagccaattccacatagtgacatgactgcacgt
aaagaatacatacatgcaaaatatgtagatcataaatttgccaaaaggttgtgcacctct
tccttagctaaaatgaatgagttgttggaatctgtgaagtccagggatttacttgcacta
attcaagtctatgcagagggagttgaactaatggagtcactaccagatcttggacaggaa
ccaggggaaacagtacttcacctagctgttcgaactgctgaccgaacctctctccaccta
gttgactttcttgtacagaatagtggtaatctggacaagccaactgcaaaaggaaacact
gctgtacattactgctgcatgttcgataaagtagaatgtttaaaattgcttcttcggggc
aaaccaagtttaaatctagtaaaccagggtggagaaacagccctagatatagcgagaaga
ttgcagcgtctgcagtgtgaagaattgatcagtcaagctaccttaggaaaaattaatcct
catgttcacgtagaatatgagtggcagttacggcaagaagaaattgatgaaagtgatgat
gacttggacgtaaagaccagccctgtaaaaaaagaacgttctccaaggccacagagctgc
tgccactcttctagtctctccccacaagataaacttatgatccccggacttggcatagca
cgggaaaagcagcgactgtcatatggggcatttagtaatcaaatatatggaagtggcacg
gattctccaacatcaccggccactgatgcccctccacttcctcctaggaatccaagcaaa
gctccacatggcccagtccctccttcagtccttcctgtaggtccccaggtcacaaccggc
agctccactttatcaaagaagagaccaccgcccccaccccctggacacaaacgaacctta
tctgacccaccaagcccgctacctcatggtccccagaataaaggtctgattccttggggc
acagatactggtcccccacagtcaaatcgaacaggaaataagtttgagggattgcctcaa
caatcaagtactggaactggaaccacaaaaactgccttaggtccacgggtgcttccaaag
ctacctcaaaaagtgtctctgagaaaaatcgatagtatccatcacagttcagtagacaaa
tcaagtccagacacttttcagaagccacatccgggagatctgacccagaaatcatatgtg
gaagaactaccccagaagccgcatccgggcgacctgccccagaagccgcatccgggcgac
ctgccccagaagccgcatccgggtgacctgccccaaaaacccaaagatctgcctccaaaa
ccacagccaggagaaatccctcaaaaaccccacataggagaagtcatccaaaagtcccag
cctggggaggtgtcccaaaagccacaggctcaagagatttctccaaaaccacagtcaagg
gacatgctgcagaaacagccatctgaagatgcgaatggtacatctcccagtttacctgaa
acccctgtacccctaccacgcaagataaatacagcaaagaacaaaatccgccgggtaaaa
accatatatgactgccaagctgacaatgacgatgaacttacctttattgagggggaagtg
attgttgtaaccggtgaagaggaccaggagtggtggattggctatattgaggggcaacct
gacagaagtggtgtctttccagtgtccttcgtgcacattttatctgattaa
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