Rhincodon typus (whale shark): 109937755
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Entry
109937755 CDS
T06055
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109937755 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109937755 (slc6a4a)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109937755 (slc6a4a)
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Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
109937755
NCBI-ProteinID:
XP_048468710
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Position
26:complement(16809097..16873757)
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AA seq
658 aa
AA seq
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MAVILPLNNEISPLNSEKEVSEPIKDEDYKENGVLIKNSISGHKLSEDGDKSPSGSLEKG
DAGCMFNGYSAVQSPGGRSSPGDGDRAAPLASLPLQEIDKAPAIARETWSKKADFLFSVI
GYAVDLGNVWRFPYIAYQNGGGAFLIPYLLMAVFGGIPLFYMELALGQYHKNGAISIWRK
ICPIFKGIGYAICIVALYVSFYYNTIIAWALYYLYSSFTSELPWTSCNNKWNTQNCTKYF
VKDNITWTKYSTSPAEEFYIRQVLQVNKSNGLDDLGGISWQLALCLFFIFVVVYFSIWKG
VKTSGKVVWVTATLPYVVLFILLIRGATLPGAWRGLLFYLKPEWNKLLTTQVWVDAAAQI
FFSLGPGFGVLLAFASYNKFNNNCYKDALVISTVNCLTSFMSGCVIFTVLGYMAEKRNEE
VADVAKDTGPSLLFITYAEAITNMPASTFFAIIFFLMLITLGLDSTFAGLEGVITAVLDE
YSELLRKRREWFVLGLVIVCYLGALSTLTYGGAFVVKFFEEYATGAAIIAVVFLESIAVS
WFYGMKRFCRDVKEMLGFSPGWFWQICWFAISPIFLLFIIGSFLSAPLELKLFNYTYPYW
TAVVGYCVGTSSFICVPSYMVYKIIITPGTFKQRILRSITPEVEENETPNSGVHLNSV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgattctccccctaaacaacgagatctctcccctcaactccgaaaaagaggtg
tcggagcccattaaagatgaggattacaaggagaatggcgtgctgattaagaactccatt
tccggccacaagctttccgaagacggcgataagtcaccctccggcagcttggagaaaggg
gacgcgggctgtatgttcaatgggtactcggctgtgcagagcccagggggacggagcagc
cccggcgatggagatcgagctgctcccctggcctcactgccgctgcaggagatcgacaag
gcgccggctatagcccgggaaacctggagcaaaaaagcagacttcttattctcggtcatc
gggtacgcggtggacctgggcaatgtctggcgtttcccttacatcgcgtaccagaacggg
ggcggagcctttctcatcccctatctcctgatggctgtgtttggaggcatcccactcttt
tatatggagttggcgttgggacagtatcacaaaaatggagcaatttctatatggaggaaa
atatgcccaattttcaaagggattggatatgcaatctgtatagtagcactatatgtttcc
ttttactacaataccattatcgcctgggctttgtactacctctactcatcatttacttct
gagctcccatggaccagctgtaacaataaatggaatactcagaactgcaccaaatacttt
gtaaaagataacatcacctggaccaagtactccacctctcctgcagaagagttttacatt
cgccaagtacttcaggttaacaaatcaaacggattggatgacctgggtggcatcagctgg
cagttagcactttgtctcttctttatatttgttgtggtgtattttagtatttggaaaggt
gtaaagacttctggaaaggttgtgtgggtgacagccactctcccctatgttgtactgttt
attctcctgatacgaggtgccactctacctggagcctggagaggactgctcttctacctt
aaacctgaatggaacaaactgcttaccacccaggtgtgggtggatgctgctgcacagatt
ttcttttcacttggcccaggatttggtgtgctcttggcattcgccagctacaacaaattt
aataacaactgttacaaggatgcattggtcatcagcactgtgaactgcttgaccagtttc
atgtctggttgtgttatatttactgttcttggctacatggcagaaaagaggaatgaagaa
gtggcagatgtggccaaagacaccggccccagtctacttttcattacttatgcagaggca
atcaccaatatgcctgcatccacatttttcgctataatatttttcctaatgttgatcact
ttgggcttggacagtacgtttgcaggcctggaaggagtgataacagcagtactagatgaa
tattcagagctacttcgaaaacgtcgtgaatggtttgtgctgggcctggtcatagtctgc
tatttgggagctctgagcacccttacatatggtggagcatttgtggtgaagttttttgaa
gaatatgctactggagctgctatcattgctgtcgtttttctagaatccatagcagtgtct
tggttttacggaatgaaacgtttctgcagggatgttaaagaaatgcttggctttagcccc
ggctggttctggcagatatgctggtttgcgattagcccaattttcctactgttcatcatt
ggcagtttcctgtcagctcctctagaacttaagctctttaattatacatatccctattgg
actgcagtagttggctactgcgttggtacttcatcatttatctgtgttccgtcctacatg
gtttacaaaattataattactccaggaacatttaaacagcgaattttgagaagtatcact
ccagaagttgaagaaaatgaaactcctaattctggtgtccacctgaattctgtctga
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