Rhincodon typus (whale shark): 109937771
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Entry
109937771 CDS
T06055
Name
(RefSeq) glial fibrillary acidic protein
KO
K05640
glial fibrillary acidic protein
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109937771
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109937771
Membrane trafficking [BR:
rtp04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
109937771
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
109937771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
GAS
TolA_bind_tri
BLOC1_2
DUF1664
Baculo_PEP_C
Cytochrome_C554
DUF7491
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
109937771
NCBI-ProteinID:
XP_048470516
LinkDB
All DBs
Position
30:2526614..2606867
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AA seq
448 aa
AA seq
DB search
MSMSIETMQTSSYRKRFGGLSTIPPSRYSFTKRSVLPSSSRSSMIRLKHINYPTKSSTLF
QEKLDFSLSDALNAEFKETRTNEKFEMMELNDRFANYIEKVRFLENQNKVLATELNQIKG
KEPSRLGDMYLDEIRELRQQLDQLNSSKARLEIERDNLLEDHNNLKQRYDTLRYVHQLEE
AENNLNAFRQDVDDAALIRIDLERKIESLQDEIDFLKKIHDEEIRELQDQLQMQQVHVDV
DVSKPDLTAALKDIRIQYESVASKNLQEAEEWYKSKFSDLTDAATRQAEALRQAKQETND
YRRQIQCLTCDLEGLKGTNESLERQLREMEERFNYETSNYQDTVSQLERDIQNLKEEMAR
HLQAYQDLLNVKLALDIEIATYRKLLEGEESRISMPVQSFSSLQIRETSLESKGSTDIQA
RRNILIKTVETRDGQVINETNAERKELP
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgagcatcgagacaatgcagacctcgtcttacagaaagcgttttgggggcctc
agtaccatccctccgagcagatacagcttcacaaagaggtctgttctgccaagttcctcc
agaagctcaatgattcgattgaagcacatcaactacccaactaaaagttccaccttgttc
caagagaagctcgatttctccctatctgatgccctcaacgctgagttcaaggagacacgg
accaatgagaaatttgagatgatggaactgaacgaccgctttgccaactacatcgagaag
gttcgcttcctggagaatcaaaacaaggtcctagccactgagctcaaccagatcaagggg
aaggagcctagccggctgggggatatgtacctggatgagatcagggagttgcgacagcag
ttggaccagctgaatagttccaaggcccgtctggagatcgaaagggacaacctactggag
gaccacaacaacctgaaacagaggtatgacactctcagatatgtacaccaactggaggag
gctgaaaacaacttaaatgcattcagacaggatgtcgatgatgctgctttgatacggatt
gacctggaacggaaaattgaatccctgcaggatgagattgacttcctaaagaaaatccac
gatgaggaaatccgggagctgcaagatcagttacagatgcagcaggtccacgtcgatgtg
gatgtgtccaagccagatctcactgccgcccttaaggacatccgcattcagtacgagtct
gttgctagcaagaacctgcaggaggctgaggagtggtacaagtctaagttctcagatctg
accgatgcagccactcgccaggcagaagccctgcgccaggccaagcaggagacgaacgat
taccgaaggcagatccagtgcctcacatgtgacctggagggcctgaaaggaacgaatgag
tccctggaacgtcaattacgtgagatggaggaacgtttcaattatgaaacaagtaattac
caggacacggttagccaattggagcgtgacatccagaatctgaaggaggagatggcccgt
cacctgcaggcttaccaagacttgctcaacgtcaagctggctctggacatagagattgcc
acttacaggaaactcctggagggagaggagagcagaatttcaatgcctgtccagagcttc
tcatctctgcaaatcagagagacaagcctcgaatctaaaggctccacggatattcaggca
agaaggaacattctgataaaaacagtggaaaccagggatggtcaggtaatcaatgagacc
aatgcagagcgcaaggagctgccatga
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integrated database retrieval system