KEGG   Rhincodon typus (whale shark): 109937771
Entry
109937771         CDS       T06055                                 
Name
(RefSeq) glial fibrillary acidic protein
  KO
K05640  glial fibrillary acidic protein
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rtp04131]
    109937771
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    109937771
Membrane trafficking [BR:rtp04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    109937771
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     109937771
SSDB
Motif
Pfam: Filament Filament_head GAS TolA_bind_tri BLOC1_2 DUF1664 Baculo_PEP_C Cytochrome_C554 DUF7491 TMF_DNA_bd
Other DBs
NCBI-GeneID: 109937771
NCBI-ProteinID: XP_048470516
LinkDB
Position
30:2526614..2606867
AA seq 448 aa
MSMSIETMQTSSYRKRFGGLSTIPPSRYSFTKRSVLPSSSRSSMIRLKHINYPTKSSTLF
QEKLDFSLSDALNAEFKETRTNEKFEMMELNDRFANYIEKVRFLENQNKVLATELNQIKG
KEPSRLGDMYLDEIRELRQQLDQLNSSKARLEIERDNLLEDHNNLKQRYDTLRYVHQLEE
AENNLNAFRQDVDDAALIRIDLERKIESLQDEIDFLKKIHDEEIRELQDQLQMQQVHVDV
DVSKPDLTAALKDIRIQYESVASKNLQEAEEWYKSKFSDLTDAATRQAEALRQAKQETND
YRRQIQCLTCDLEGLKGTNESLERQLREMEERFNYETSNYQDTVSQLERDIQNLKEEMAR
HLQAYQDLLNVKLALDIEIATYRKLLEGEESRISMPVQSFSSLQIRETSLESKGSTDIQA
RRNILIKTVETRDGQVINETNAERKELP
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagtatgagcatcgagacaatgcagacctcgtcttacagaaagcgttttgggggcctc
agtaccatccctccgagcagatacagcttcacaaagaggtctgttctgccaagttcctcc
agaagctcaatgattcgattgaagcacatcaactacccaactaaaagttccaccttgttc
caagagaagctcgatttctccctatctgatgccctcaacgctgagttcaaggagacacgg
accaatgagaaatttgagatgatggaactgaacgaccgctttgccaactacatcgagaag
gttcgcttcctggagaatcaaaacaaggtcctagccactgagctcaaccagatcaagggg
aaggagcctagccggctgggggatatgtacctggatgagatcagggagttgcgacagcag
ttggaccagctgaatagttccaaggcccgtctggagatcgaaagggacaacctactggag
gaccacaacaacctgaaacagaggtatgacactctcagatatgtacaccaactggaggag
gctgaaaacaacttaaatgcattcagacaggatgtcgatgatgctgctttgatacggatt
gacctggaacggaaaattgaatccctgcaggatgagattgacttcctaaagaaaatccac
gatgaggaaatccgggagctgcaagatcagttacagatgcagcaggtccacgtcgatgtg
gatgtgtccaagccagatctcactgccgcccttaaggacatccgcattcagtacgagtct
gttgctagcaagaacctgcaggaggctgaggagtggtacaagtctaagttctcagatctg
accgatgcagccactcgccaggcagaagccctgcgccaggccaagcaggagacgaacgat
taccgaaggcagatccagtgcctcacatgtgacctggagggcctgaaaggaacgaatgag
tccctggaacgtcaattacgtgagatggaggaacgtttcaattatgaaacaagtaattac
caggacacggttagccaattggagcgtgacatccagaatctgaaggaggagatggcccgt
cacctgcaggcttaccaagacttgctcaacgtcaagctggctctggacatagagattgcc
acttacaggaaactcctggagggagaggagagcagaatttcaatgcctgtccagagcttc
tcatctctgcaaatcagagagacaagcctcgaatctaaaggctccacggatattcaggca
agaaggaacattctgataaaaacagtggaaaccagggatggtcaggtaatcaatgagacc
aatgcagagcgcaaggagctgccatga

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