KEGG   Rhincodon typus (whale shark): 109937789
Entry
109937789         CDS       T06055                                 
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 homolog A-like isoform X1
  KO
K15516  fragile X mental retardation protein
Organism
rtp  Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109937789
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109937789
   Factors involved in mRNA localization
    Other mRNA localization factors
     109937789
   mRNA cycle factors
    Stress granule specific factors
     109937789
SSDB
Motif
Pfam: FXMRP1_C_core FXR_C1 KH_9 KH_1 KH_KhpA-B KH-I_KHDC4-BBP FXR_C3 Rotavirus_VP3
Other DBs
NCBI-GeneID: 109937789
NCBI-ProteinID: XP_048476115
LinkDB
Position
45:complement(1286987..1308777)
AA seq 569 aa
MERLRPVNPNKTATKTMFHKHTIPVPEDLKEACANENAHKDFKKAVGAHSIVYNHSTGEL
VLLSINESTVKRAGLLSDMHFRSIRTKLMLMSRNEEATKHLETTKQLAAAFQEEFRVRED
LMGLAIGTHGANIQQARKVPGVTAIELDEDTCTFRIYGETPEAVKQARGYLEFSENSVQV
PRSLVGKVIGKNGKVIQEIVDKSGVVRVRIEGDNDKRLPREEGMVPFTFVGTKENLVNAQ
VLLEYHLSYLTEVEQLRLERLQIDEQLRQIGMGYRPLSTRADKERGYMTDDSTASSIHSS
RSYSGRGRGRRDNNSDFSNASETESERRDELSDWSLGQADEDRDRRQGSDPNRRRPAGGR
GRGGPPSGRGRGGGRGGTSSISAVLKDPDSNPYSLLENAETEQAGDTDASESHANMSRRR
RSRRRRTDDDATMMDGVVESDTASVNENGVDESEGRPPRRNRSRRRRNRGNRLDGSLSRD
RQPVADYISRAESQSRQCVSQKEQTEGAPEQEPKEKQLERVDPSDEPSAVPNGPTNSLSD
SATKTAGSSQECGRAGATIKQQAVVNGVS
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggagaggcttcgccctgtcaatcctaacaagactgccaccaagaccatgttccacaaa
cacaccatcccagtgccagaggaccttaaagaggcctgtgcaaatgagaatgctcacaag
gatttcaagaaagctgtcggagcccactccatcgtgtacaaccacagcaccggcgagctg
gtactcctgtctattaatgagtcaactgtgaaacgggcgggcttgctgagtgatatgcac
ttccgcagtattcgtaccaaactgatgctgatgtcccgaaacgaggaggcaactaaacac
cttgagaccaccaagcagctggcagctgctttccaggaggagttccgtgtccgggaggat
ctgatggggcttgcgattggaacacacggtgccaacattcagcaggccagaaaggtacct
ggggtgacagcaattgaactggatgaggacacatgtacattccgaatatatggagagaca
ccagaagcagtaaaacaggctcggggttacctggaattctctgagaactccgtccaagtg
ccacgaagcttggttggcaaagtgattggcaagaatgggaaagtaattcaggagattgtg
gacaagtctggtgtggtgagggttcggattgaaggagacaatgacaagagactgcccagg
gaggagggtatggttcctttcacatttgttggcaccaaggagaatctagtgaatgctcaa
gtgctgctggagtatcacctgtcctatctgacggaggtagagcagctgcgattggagagg
ctgcagatagacgaacaactccgacagattggcatgggataccgtccactgtccacgcgt
gcagacaaggagcgtggctacatgacagatgacagcactgcctcttccatccacagctcg
agatcctacagcggccgaggacgaggaaggcgagacaacaactccgacttctccaatgct
tccgagaccgaatcagagcgcagggacgagctgagtgactggtcgttgggccaggccgac
gaggatcgggatcgcaggcagggatcggatcctaaccggaggaggccagctggaggccgt
gggcgaggaggtcctccctctgggagagggcgtggaggaggcagaggtgggacatcatcg
atcagtgctgtgctgaaggatcccgacagcaatccctacagcctgctggagaacgccgaa
actgaacaagccggcgacacggatgccagtgagtcgcacgccaacatgagccggcgccgt
aggtctcgcagacgccgcaccgatgatgatgccaccatgatggatggggttgtggagtcc
gacactgcgtctgtcaatgagaacggtgtggacgaaagcgaggggcgacctccccgaagg
aaccggagccggcggcgccgcaatcgtggaaacagactggacggttccctgagccgagac
aggcagccagtggccgattatatttctcgtgccgagtcgcagagcagacagtgcgtctcg
caaaaagaacaaaccgagggagcccctgagcaggagccgaaggaaaaacaactggagcgg
gtggaccccagcgacgagcccagtgccgtgcccaacggccccaccaatagtctgagcgac
agcgccaccaagacagcgggcagctcccaggagtgtgggagagccggtgccaccatcaag
cagcaggctgtggtcaacggtgtttcgtaa

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