Rhincodon typus (whale shark): 109938014
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Entry
109938014 CDS
T06055
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04810
Regulation of actin cytoskeleton
rtp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109938014 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
109938014 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109938014 (cyfip1)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109938014 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
109938014 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
MauJ
Motif
Other DBs
NCBI-GeneID:
109938014
NCBI-ProteinID:
XP_048453847
LinkDB
All DBs
Position
6:14670000..14843371
Genome browser
AA seq
1212 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEDLPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIDRFCNEVKRLCHAERRRDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSDPQSIQESQNLSMFLANHNKITQTLQQQLEVIPGYEELLAD
IVNICIDYYENRMYLTPGEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLNKIDRFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWASTSSSSSPQYNIVEQMIQIREDHMRFI
SELARYSNSEYSWKLVHPTDKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGL
QVLMGRMESVFNHAIRHTIYAALQNFAQKTLREPLRQAIKKKKNVIQSVLQAIRKTICDW
DVGHEPTNDPALRGEKDPRGGFEIKVTPRAVGPSSTQLYMVRTMLESLIADKSGAKKTLR
SSLEGPTILAIEEFHRHSFFYTHLLNFSETLQHCCDLSQLWFREFFLELTMGRRIQFPIE
MSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQ
FVYKLADQIFAYYKILAGSLLLDKRLRAECKNQGANIPTPPSNRYETLLKQRHVQLLGRS
IDLNRLITQRISAAMYKSLELAITRFESEDVTSIVELEGLIEVNRMSHKLLSKYLTLDSF
DAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTQRFVRTVLPFSQEFQRDKQP
NAQPQYLYGTKALNLAYSSIYSNYKNFVGPPHFRAICKLLGYQGIAVVMEELLKVVKSLL
QGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVG
NAVLFCLLIEQSLSLEEVCDLLHAAPFQNILPRIYVKEGERLDTKMKRLEAKYAALHLVP
LIERLGTPQQVAIAREGDLLTKERLCCGLSMFEVILTRIRQFLDDPIWRGPLPTNGVMHV
DECVEFHRLWSAMQFVYCIPVGAHEFTVEQCFGDGLHWAGCMIITLLGQQRRFDVLDFCY
HLLKVQKHDGKDDVLKNVPLKKMVDRIRKFQILNNEIFAILNKYLKSGDSENVPVEHVRC
FQPPIHQSLASS
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcaagtgactttggaagatgccctatccaatgttgacctgttggaagactta
ccattgcctgatcaacagccttgtattgaaccaccgccttcatcacttttgtaccaacca
aatttcaacaccaactttgaagatagaaatgcatttgttacaggaattgcaagatacatt
gagcaagcaaccgttcattccagcatgaatgaaatgctagaggaggggcaggaatatgct
gttatgctgtatacttggagaagttgttcaagagctattcctcaggttaagtgcaacgag
cagccaaatagagtagaaatttatgaaaagacagtggaagtccttgagccagaggtcact
aaacttatgaatttcatgtatttccagcgcaacgcaattgatcgattttgtaatgaggtg
aagcgactctgtcatgcagagaggaggcgagattttgtttcagaagcttatcttctcaca
ctgggcaaattcattaacatgttcgcagtattggatgaattgaagaacatgaaatgcagt
gtaaaaaatgaccactctgcatacaaacgagctgctcaatttcttcggaaaatgtcagac
ccacaatccatacaagaatctcaaaatctctccatgtttcttgcaaaccataacaaaatt
actcagacgctgcagcagcaacttgaagtcattccaggctatgaggagcttcttgctgac
attgtaaatatttgcattgattattatgagaacagaatgtaccttactcctggtgagaaa
catatgctgctcaaggtgatgggctttggactttaccttatggatggaagtgtaagcaat
atatacaagcttgatgccaagaaaagaataaacttgaacaagattgatagattttttaag
caattgcaggtggtgcctttatttggtgacatgcagatcgagttggccagatacatcaag
acaagtgctcattatgaggaaaacaaatcaagatgggcctccacatcttccagtagcagt
cctcagtacaacattgtggaacaaatgattcagatcagagaagatcacatgcgtttcatc
tctgagctggctcgctatagcaacagtgagtactcttggaaacttgtgcatcccactgat
aagtactctaataaagactgtccagataatgcagaagaatatgagagagcaactagatac
aattacacaagtgaagagaagtttgcacttgttgaggttattgccatgataaaaggattg
caggtgctgatgggcagaatggagagtgtgttcaatcatgcaattcgacataccatttat
gctgcactccaaaattttgctcagaaaacacttcgtgaacctttgcgtcaggctatcaaa
aagaagaagaatgtgattcagagtgttttgcaagcaattagaaagactatttgtgattgg
gacgttggacacgaaccaacaaatgatcctgcgctccgaggagagaaggacccaagagga
ggctttgagatcaaagttactccccgggcagtcggaccatctagtacccagctctacatg
gttagaactatgctagagtccctcattgctgacaaaagtggcgcaaagaaaaccttgaga
agtagtcttgagggccccaccattttggcgatagaagaatttcaccggcattcattcttc
tacactcatttactcaatttcagtgaaactcttcagcattgctgcgatctgtctcagctt
tggttcagagaattcttccttgagctgacaatgggcagaagaatccagtttccgattgag
atgtctatgccatggattttgactgaccatattttggagaccaaagaagcctccatgatg
gagtatgtgttatattccttggacctttacaatgacagtgcccattatgcactgactaag
ttcaagaagcagttcctttatgatgagattgaagcagaggtaaacctttgtttcgaccaa
tttgtatataaattggctgatcaaatatttgcttactacaagattctggctggaagcctt
cttctagacaaacggctacgagcagagtgtaagaatcagggagctaacataccaacacct
ccatcaaatagatatgagactttattgaaacaaagacatgtacagcttcttggtaggtca
atagacctgaatcggctgatcactcaaagaatttcagcagcaatgtacaaatcattagaa
ttggcaatcacacgatttgagagtgaagacgtcacctctattgtggaacttgaaggtctg
atagaagtcaaccgtatgagtcacaagctgctcagtaaatacttaactctggacagtttt
gatgccatgttcagagaagccaatcacaatgtatctgcaccatatggaagaataactctc
catgttttctgggaactgaattatgatttccttccaaactactgctacaatggttctaca
caaaggtttgtgcgtactgtgctgcccttctcccaagagtttcaaagagataaacaacca
aatgcacagccacagtatttatatggaactaaggcattgaacttggcttacagcagtatt
tacagcaactacaaaaattttgtgggccctccacattttagagcgatttgcaagcttctc
ggctatcaaggaattgctgtggtaatggaggaactgctgaaagttgttaaaagcctacta
caaggaaccatcttgcaatatgtgaagactttaatggaagtgatgcctaaaatctgccgc
ctacctagacatgagtatggttcaccaggaattctggaattcttccatcatcagctgaaa
gacattgtggagtatgcggaactgaagactgtgtgttttcaaaatttacgagaagttggc
aatgctgttcttttctgtcttcttattgagcagagtctgtctctcgaagaagtctgtgac
ttgctacatgcagcaccattccagaatattttgccaagaatctatgtcaaagagggtgag
cggctggacacaaagatgaagagactggaagctaaatatgctgcacttcatcttgttcca
ctgatagaacgacttggaacacctcagcaagttgcaattgcgagagaaggtgatctgctg
acaaaggaacggctgtgttgtggtctctccatgtttgaagtgattctgacacgaatccgg
cagttcttggatgatcccatatggcgtggacctcttccgactaatggagtaatgcatgtg
gatgaatgtgtggaattccacaggctgtggagcgccatgcagtttgtttactgtattcct
gtgggagcacatgagttcactgtagagcagtgcttcggagatggattgcactgggctggc
tgtatgatcattacactgcttggacagcaacgccgatttgatgtcctcgacttctgttat
catttgctcaaagttcagaaacatgatgggaaagatgatgtcctcaaaaatgtgcctttg
aagaaaatggttgacagaattcgcaagttccagattctcaataatgagatctttgctatc
ttgaacaagtatctgaagtcaggtgacagcgagaatgtacctgtggagcatgtccgctgt
ttccagccacctattcatcagtcactagcaagctcatga
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