Rhincodon typus (whale shark): 109938018
Help
Entry
109938018 CDS
T06055
Symbol
ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109938018 (ssu72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rtp03021
]
109938018 (ssu72)
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109938018 (ssu72)
Enzymes [BR:
rtp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109938018 (ssu72)
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
109938018 (ssu72)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
109938018 (ssu72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
DUF503
Motif
Other DBs
NCBI-GeneID:
109938018
NCBI-ProteinID:
XP_048471062
LinkDB
All DBs
Position
31:complement(20114773..20220791)
Genome browser
AA seq
194 aa
AA seq
DB search
MPQNPLRVAVVCSSNQNRSMEAHSILSKKGFNVRSFGTGTHVKLPGPAPDKPNIYDFKTT
YDQMYSDLIRKDKELYTQNGILHMLDRNKRIKSRPERFQTCKDQFDLIVTCEERVYDQVL
EDLNSREQETFQSVHVINVDIQDNHEEATIGAFLICELCQCIQRTEDMENEIDELIQELE
EKSGRTFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaatccgctgcgagtggcggtggtgtgttcgagtaaccagaaccggagtatg
gaggcgcacagtatcctcagcaaaaaaggcttcaatgtccgatcgtttggcacaggaaca
cacgtgaagctaccaggaccggccccggacaagccaaatatatacgatttcaaaactaca
tatgatcagatgtacagtgatctcattaggaaagacaaagaactatatacacagaatgga
attcttcacatgttggacagaaacaagcggataaaatctcgaccagaacgtttccagacc
tgcaaagaccagtttgatctaatagtgacctgtgaggaacgggtatacgatcaggtgctt
gaagatctgaattcgagagaacaggagacattccagtcagtgcatgtcataaacgtggac
attcaggataatcatgaagaagccacaatcggagctttcctcatttgtgaactgtgccaa
tgtatccagcggactgaagacatggagaatgagatcgatgagcttatccaggagctggag
gagaagagcggccggaccttccttcacactgtctgcttctactga
DBGET
integrated database retrieval system
