Rhincodon typus (whale shark): 109938027
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Entry
109938027 CDS
T06055
Name
(RefSeq) rho guanine nucleotide exchange factor 4
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
109938027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109938027
Membrane trafficking [BR:
rtp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
109938027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
109938027
NCBI-ProteinID:
XP_020392092
LinkDB
All DBs
Position
13:complement(61010865..61052270)
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AA seq
492 aa
AA seq
DB search
MDVQELGFKAGDVIEVVDATNKEWWWGRIADSEGWFPASFVRLWVNQDEPMEEYPVRVED
GKPDDANSANRRLATGQSKKDQMRTNVISEIMSTENDYIKHLKDICEGYVKQCRKRTDMF
TEEQLRTIFGNIEDIYKFQKKFLKGLEKKFNKDQPHLSEIGSCFLEYQTDFQIYSEYCNN
HPNAYTELSKLMKINKYVYFFEACRLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYT
NPEHRDYNDVEAALNAMKNVAKLINERKRRLENLDKIAQWQSSIENWEGEDVLARSSELI
HSGELTKVSQPQAKSKQRIFFLFDHQVVFCKKDLLRRDILYYKSRIDTDSMEVVDVEDGK
DKDFNISVKNAFKLQNKFTNEVHLFCAKKLSVKERWLQAFENERKQVQLDKETGFAITEV
QKKQAMMNAKKSHPTGKPKAVTRPYYDFLTLRQKHPMMPSTIPQQQVYMLAEPKRKPSNF
WHNIGRLTPFKK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggatgtccaggagctgggcttcaaggctggtgatgtcattgaagtagtggatgctacc
aacaaagagtggtggtggggcaggatcgcggacagtgaaggctggttccctgccagcttt
gtgcggttgtgggtcaaccaggatgaacccatggaagaatacccagtcagggtcgaggac
ggaaaacctgatgatgccaacagtgccaaccgtcggctggccacaggccaatcaaagaaa
gaccaaatgcggaccaatgttatcagtgagattatgagcaccgagaatgattatatcaaa
catttgaaggatatctgtgagggttatgttaagcagtgccggaaaaggacagacatgttc
acagaggagcagttacggaccatctttgggaacatcgaagacatttacaaattccagaag
aaatttcttaaaggtctggagaaaaagttcaataaagatcaaccccacctgagtgaaatc
ggttcctgcttccttgaatatcagacagatttccagatatactctgagtactgcaacaac
caccctaatgcttacactgagctgtccaaactcatgaaaatcaacaagtacgtgtacttt
tttgaggcatgtcgcctgcttcagaagatgattgatatctcattggatggctttctgctc
acaccagtccagaagatctgcaaatatccacttcagttggcagagctgctcaagtacacc
aatccagagcacagagattacaatgatgtggaggctgcgttgaatgccatgaagaatgtt
gccaagttgattaatgagcgcaagaggcggctggaaaacctcgacaaaattgcccaatgg
cagagttcaatcgagaattgggagggtgaagatgttttggcccgaagctcagagctcatc
cattctggtgaattaacaaaggtctcccaacctcaagccaagagcaaacagcgaatcttt
ttcctctttgaccatcaggtggtcttttgcaagaaggacctcctgcgtcgtgacatcttg
tactacaaaagcaggattgacacagacagcatggaagtggtggatgtcgaagatgggaag
gacaaggacttcaacatcagtgtcaagaacgcattcaaacttcaaaacaagttcacaaat
gaggtccacttgttctgcgcaaagaagttgtcggtcaaggaacgttggcttcaagccttt
gaaaatgaacgaaaacaggttcaactggacaaagagacaggctttgctatcacagaagtt
caaaagaaacaggccatgatgaacgcaaaaaaatcacatccgactgggaagcctaaagct
gtcaccaggccttactatgactttctgacattgcggcaaaaacatccaatgatgccttca
accatcccccaacagcaggtctacatgctggctgagcccaaacgcaaaccatccaatttt
tggcacaatatcggaagactgacaccattcaagaagtga
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