Rhincodon typus (whale shark): 109938097
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Entry
109938097 CDS
T06055
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
109938097
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rtp00535
]
109938097
Proteoglycans [BR:
rtp00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
109938097
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_14
LRRNT
LRR_5
LRR_LRWD1
LRR_EndoS
IL10
Motif
Other DBs
NCBI-GeneID:
109938097
NCBI-ProteinID:
XP_048468125
LinkDB
All DBs
Position
25:14290082..14339946
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AA seq
355 aa
AA seq
DB search
MKLIHLLVFAAVFVGGACQYTYGYFNWLARVMGYSRYYSNQYYGTEREPSLATNCPAECT
CPSIFPRAMYCDTRMLKYIPEVPARMKYVYLQNNQIDAVPDGVFDNATHLVWVVLHWNKI
SNDKIGANVFSKLTNLERMYLGHNNLTKIPFPLPKSLRELRVAGNKISTVQPDVLEGLDN
LTKLLLNDNELEDIGSSLKVLKSLSYLDLSNNHLKKLPEVLPDSLHQLYLDFNHISSIPD
EYFQQFPKLQYARISNNELTDNGIPLNTFNVSSLIELDLSHNKLQKIPPVNENLENLYLH
ANKIKEFTVDSFCRTMGLMSFSKIRVLRLEGNSIKQDNIPQEVNSCLRQARIINI
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgatccacctgctggtttttgcagcagtttttgtaggaggtgcctgccagtac
acctatgggtatttcaattggctcgcacgtgttatgggatattctcggtattacagtaat
caatattatgggactgagcgtgagccttcgttggcaaccaactgccctgctgaatgcacc
tgcccatctatctttcccagggctatgtactgtgatacccgtatgttaaaatatatcccc
gaggtgccagcccggatgaaatatgtttacctgcagaacaaccagatcgatgctgtgcca
gatggagtatttgacaatgctactcatctcgtctgggttgtcctccattggaataaaatt
tccaatgacaagataggtgcaaatgtattctccaaactgacaaacctggagagaatgtac
ttgggacataacaatctcacgaagattccctttcctttgccaaagtcgctgagggagctg
agagttgcaggaaacaagatttcaactgttcaacccgatgtactggaaggtctcgacaac
ttgactaagctactgctgaatgacaatgagctggaagatatcggaagctccctcaaagtt
ttaaagtctttgtcttacttggacctcagcaataaccacctaaaaaaactccctgaagta
cttccagactcactgcaccagctgtacctggatttcaatcacatcagctcaattcctgat
gagtacttccaacagttccctaaacttcaatatgcgcggatctcaaataatgaactaacg
gataatggaataccattaaacacatttaacgtgtccagtttgattgagttggatctctcc
cataataagctgcagaagattcctcctgtcaatgagaacttagaaaacctgtacctacat
gccaacaagatcaaagagttcaccgtggacagcttctgtagaaccatgggattaatgagc
ttctccaagattcgagtgcttcgactggagggcaacagtatcaaacaagataatattccg
caagaagtcaacagctgtcttcgccaagcaagaataataaatatttaa
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