Rhincodon typus (whale shark): 109938146
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Entry
109938146 CDS
T06055
Symbol
scube1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
109938146 (scube1)
Domain-containing proteins not elsewhere classified [BR:
rtp04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
109938146 (scube1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
Ephrin_rec_like
cEGF
CUB
EGF_CA
EGF_3
EGF
TNFR_ELAPOR1_6th
Orbi_NS3
hEGF
DUF5398
Motif
Other DBs
NCBI-GeneID:
109938146
NCBI-ProteinID:
XP_048463636
LinkDB
All DBs
Position
18:15357867..15488525
Genome browser
AA seq
858 aa
AA seq
DB search
MNCMNKDHGCAHICREAPKGGVACECRPGFELAKNQRDCTLTCNYGNGGCQHTCDDADNG
PVCGCHQKYALHSDGKTCIEKDEAAIESSEYNATSVVDVDKRVKRRLHMETCAVNNGGCD
RTCKDTATGVRCSCPVGFTLQPDGKTCKDIDECLVNNGGCDHFCRNTVGSFECSCRKGYK
LLTDERSCQDIDECSFERTCDHMCINYPGSFECLCHKGYTLYGLTHCGDIDECSINNGSC
DYSCVNTMGSYECVCPPGKKLHWNKKDCVEVVKCVRNAKIARKVQLVCSKSGGVESCSLS
CPSKALFVADSENSYTFSCGVPLQPTKSSQKRNTSLPNCADPLAPPIKQKARFKIKDAKC
HLRPRNKEKVKDSLKQTISGGHFPCTDNCHVTFVNLKCDSSKKRRRGRKSPSKEVSHITA
EFEVEMKSEEVTESCNMECVRKRMEQKLQTAIKTLRKSINKQQFYIQFSGTEYEVAQKPA
KIHENQEACSTGQVLQDGKCISCETGHYYSGEHKQCLLCPPGTYQDTKGQLSCEPCPSND
GQGMAGARNVSECGGQCSQGHFSSDGFRPCRSCPFGTFQPEPGRTQCFHCGGGLMTKYEA
AVSFQDCETKVHCSPGHYYNSTTHRCIRCPVATYQPEFGQNYCITCPGNTTTDFDGSTNV
TQCKNQQCGGDLGEYTGFIESPNYPGDYPSNVECIWNINPPPKRRILIVVPEIFLPMEDE
CGDVLVMRKSSSPTSITTYETCQTYERPIAFTSRSRKLWIQFKANEGNSAKGFQVPYVTY
DEDYQQLIEDIVRDGRLYASENHQEILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPR
SFIKLLRSKVSRFLRPYK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtatgaacaaagatcatggatgtgcacacatctgccgagaggcgccgaagggt
ggggtggcttgtgaatgcagacctggatttgagctcgccaaaaaccagagggactgcaca
ttaacctgtaactatggaaatgggggctgtcagcatacctgtgacgatgcggataatgga
cctgtgtgtggctgtcatcagaaatacgctctgcattcagatggaaaaacatgcatagag
aaggatgaggctgcaattgagagctctgagtacaatgccacgtcagtagttgatgtggac
aagcgggtgaaacggcggctgcacatggaaacatgtgctgtgaataatggaggctgcgat
cgtacatgcaaagacaccgctacaggagtccgctgcagttgtcctgttggattcacactg
cagcctgatgggaaaacatgcaaagatattgatgaatgtttagtaaataatggtggatgt
gaccatttctgtaggaatacggttggcagctttgagtgcagctgtcgaaaagggtacaag
cttctgacagatgagcgatcctgtcaagatatcgatgagtgttcctttgaaaggacatgt
gaccacatgtgcattaactacccaggaagctttgaatgcttgtgtcataaaggttatacc
ttatatggactgacacattgtggagacatcgatgagtgcagcattaataatgggagctgt
gattatagttgtgttaatacgatgggaagttatgaatgtgtgtgccctcctggaaagaag
ttacattggaacaagaaggattgtgtggaggtggtgaaatgtgtccgaaatgcaaagatt
gcacgcaaagtccagctcgtctgcagtaagagtggaggagtagaaagttgctctctgtcc
tgtccatccaaagcactctttgtagcagattctgaaaatagctatacttttagctgtgga
gttccattacagccaacaaaatcctcacaaaagcgaaatacaagtctacctaactgtgca
gatcctttagcaccgccaataaaacaaaaagctagattcaagattaaggatgctaagtgc
catctacgaccacgtaataaggaaaaggttaaggatagtctgaaacaaaccatatcagga
ggtcacttcccatgcacagataactgtcacgtgacctttgtgaatctaaagtgcgattct
tccaaaaagaggaggcgtggacgtaaatcgccgtcgaaggaggtgtcacacattacagca
gagttcgaggtcgagatgaagtctgaggaggtgacagagtcttgcaacatggaatgtgta
cgcaagaggatggaacaaaagctgcagacagcaattaaaacactaaggaagtccattaat
aaacaacagttctatattcagttctctgggacggaatatgaagttgcccagaaaccagca
aaaatacacgaaaatcaggaggcatgcagcacaggtcaggtgctccaggatggcaagtgt
atcagctgtgaaacaggccactactacagtggggagcacaagcagtgtctcctgtgtcct
ccaggaacctaccaagacacgaaaggacagctatcctgtgagccgtgtccaagcaacgat
ggacaaggaatggctggagctcggaacgtgtctgaatgtggaggccagtgctctcaagga
catttctcctccgatggattcagaccctgtaggtcatgtccatttggcaccttccaacca
gagccaggtcgcactcagtgttttcactgtggaggtggattgatgacaaaatatgaagca
gcagtttcatttcaagattgtgaaacaaaagttcattgttctcctggtcactattacaac
tccaccacacacagatgcataagatgtccagttgcaacttatcagcctgagtttggccaa
aactactgtattacctgtcctggaaatacaactacagattttgatggctccacaaatgtc
actcaatgtaaaaatcagcaatgcggtggcgaccttggagagtacacgggattcattgag
tctcccaactatcctggagactatccttctaatgtggagtgtatttggaatataaatcca
ccaccgaagaggagaatactgattgtagtgccagagattttcttaccaatggaggatgag
tgtggagatgttttagtgatgagaaagagttcgtcaccaacatcgatcacaacatatgaa
acatgccagacttatgagcgaccaatagcatttacttcaagatctcgaaagctgtggatt
caattcaaagctaatgaggggaacagtgccaaaggatttcaagttccatatgttacctat
gatgaggactatcagcagttaatagaagatattgtaagagatgggcgtttgtatgcttca
gaaaaccaccaagaaattcttaaagacaagaaattgatcaaagcactctttgatgtattg
gcacatcctcaaaattacttcaagtatacagcacaagaatctaaagaaatgtttcccaga
tcatttataaagttgctacgttccaaagtgtccagatttttaaggccatacaaatag
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