KEGG   Rhincodon typus (whale shark): 109938200
Entry
109938200         CDS       T06055                                 
Name
(RefSeq) tubulin alpha-3 chain-like
  KO
K07374  tubulin alpha
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp04145  Phagosome
rtp04210  Apoptosis
rtp04530  Tight junction
rtp04540  Gap junction
rtp04814  Motor proteins
rtp05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    109938200
  09143 Cell growth and death
   04210 Apoptosis
    109938200
  09144 Cellular community - eukaryotes
   04530 Tight junction
    109938200
   04540 Gap junction
    109938200
  09142 Cell motility
   04814 Motor proteins
    109938200
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109938200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rtp03019]
    109938200
   03036 Chromosome and associated proteins [BR:rtp03036]
    109938200
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rtp04812]
    109938200
   04147 Exosome [BR:rtp04147]
    109938200
Messenger RNA biogenesis [BR:rtp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109938200
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     109938200
Cytoskeleton proteins [BR:rtp04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    109938200
Exosome [BR:rtp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109938200
  Exosomal proteins of other body fluids (saliva and urine)
   109938200
  Exosomal proteins of colorectal cancer cells
   109938200
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 109938200
NCBI-ProteinID: XP_048475844
LinkDB
Position
44:complement(1970807..1975563)
AA seq 451 aa
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFLDLEPTVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHCSVGKEIVDLVLD
RVRKVADLCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQISTA
VVEPYNSVLVTHCTLEHSDCAFMVDNEAIYDVCRRNLDIERPTYTNLNRLIAQVVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPLISAEKAYHEQLSVAEITNSCFEPAN
QMVKCDPRQGKYMACCMLYRGDVVPKDVNAAIASIKGKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRALCMLSNTTAIAFAWTRLNIKFDKMYAKRAFVHWYVGEGLEEGEFQD
AREDLASLEKDYEEVGVDSSYLDRKAEEEEE
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatttccgtccacgttggccaggctggtgtgcagattggcaatgcgtgc
tgggagctgtattgcctggagcatggcatccagccggatgggcaaatgcccagtgacaag
accatcggaggtggggatgactccttcaacaccttcttcagtgagactggggcaggaaaa
catgttccccgagccgtctttcttgatctagagcccactgtgattgatgagatccgcact
ggcacctaccgacagctgtttcatcctgaacagctcatcactggcaaggaggatgcagct
aacaactacgcccggggtcactgctccgtgggcaaggagattgtggatctggtcttggat
cgcgtgcggaaggtggctgatctgtgcacagggctgcagggtttcctcatcttccatagt
ttcgggggtggcactggttcgggtttcacttccctcctgatggagagactctctgtcgac
tacggcaagaaatccaagctggagttttccgtctaccccgctccccagatctccaccgcg
gtggtagaaccatacaactcggtgctggtcacccactgcaccctcgagcactccgactgt
gccttcatggtagacaatgaggccatttacgatgtatgtcgacgaaacctcgacattgag
agaccaacctacaccaacctcaaccgtctcattgcacaggtggtgtcgtccatcacagcg
tcactccggtttgacggtgccctcaatgtggacctgacagagttccagaccaacctggtc
ccctatccccgcattcacttccctctggcaaccttcgcccctcttatttctgctgagaag
gcttaccatgagcaactctcagtggcagagatcaccaactcctgcttcgaaccagccaac
cagatggtgaaatgtgacccccgccagggcaagtacatggcgtgctgcatgctgtaccga
ggagacgtggtgcccaaggatgttaacgctgccattgccagcatcaagggcaaacgctca
attcagtttgttgattggtgcccaactgggttcaaggttggtatcaattaccagcccccg
acagtggtaccagggggcgacctggcaaaggtgcagcgggccctttgcatgctgagcaac
accaccgccattgcttttgcgtggacccggctcaatatcaaatttgataagatgtacgcc
aagcgggcatttgtccactggtacgtgggggaaggcctggaggaaggggagttccaggac
gcaagggaggacttagcctcgcttgagaaggattatgaagaagtgggggttgactcatcc
tatctggacagaaaggcagaagaggaggaagaataa

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