Rhincodon typus (whale shark): 109938207
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Entry
109938207 CDS
T06055
Name
(RefSeq) transducin-like enhancer protein 4 isoform X1
KO
K04497
groucho
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04310
Wnt signaling pathway
rtp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
109938207
04330 Notch signaling pathway
109938207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109938207
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
109938207
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TLE_N
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
CFAP251_N
ANAPC4_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
DSE1_N
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_Aladin
Beta-prop_NOL10_N
ASA1
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_WDR41
WD40_RFWD3
Transketolase_N
Beta-prop_IP5PC_F
HALZ
Motif
Other DBs
NCBI-GeneID:
109938207
NCBI-ProteinID:
XP_048451161
LinkDB
All DBs
Position
3:complement(58202658..58397876)
Genome browser
AA seq
756 aa
AA seq
DB search
MYPQARHPAPHQPAQPFKFTISESCDRIKEEFQFLQAQYHSLKLECEKLASEKTEMQRHY
VMYYEMSYGLNIEMHKQAEIVKRLNAICAQVIPFLSQEHQQQVVQAVERAKQVTMAELNA
IIGQQQQLQAQHLSHGHALPVPLTPHPSGLQPPGIPSVGSSAGLLALSSAMKDEKKHHDT
DHQRDRDSVKSSSVSPSASFRTAEKHRNSNDYSTDSKKQKTDDKDLANRYDSDGEKSDDN
LVVDVSNEDPTSPRGSPPHSPRENGLDKSRLLKKDAPISPASIASSSSTPSSKSKEIGLN
EKSTTPVSKSNTPTPRTDAPTPGSNSTPGLRPVPGKPPGIDPLGLRTPMAVPCPYPAPFG
IVPHAGMNGDLTSPGAYAGLHNISPQMSAAAAAAAAAAAYGRSPVVGFDPHHIRVPGIPP
NLSGIPGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHARQMNSLSHGEVVCAVTISN
PTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTL
SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG
HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAV
GMENSNVEVLHVTKPDKYQLHLHESCVLSLKFAHCGKWFVSTGKDNLLNAWRTPYGASIF
QSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgcaagccagacatcccgcgcctcaccaacccgcacagccctttaaattcacc
atctccgaatcgtgtgatcgcatcaaagaagaatttcagtttttgcaggcgcagtatcac
agtttgaaattggaatgtgaaaagctagccagtgaaaagactgaaatgcaacgccattat
gtcatgtattatgaaatgtcttatggtctgaatatagaaatgcacaagcaggctgagatt
gtcaagagactaaatgccatttgtgcccaagtcattcctttcctgtctcaggagcaccaa
cagcaagtggtgcaggcagtggagcgggccaagcaagtgaccatggctgagctaaacgca
atcatcgggcagcagcaacagttacaggcccaacatctatcccatggtcatgcacttcca
gtacctctcactccacacccgtctggactccagcccccaggaataccttcagttggaagc
agtgcaggactattggcactatcaagtgctatgaaagatgagaagaagcatcatgacacg
gaccaccaaagagacagagactccgtaaagagctcctcagtgtcaccatcagccagtttc
agaactgcagagaagcacagaaactcaaatgattattctactgatagtaagaagcagaag
accgatgataaggatttagcaaatcgttatgatagtgatggagagaagagtgatgacaac
ttggtggtggatgtctccaatgaggatcccacctcaccacgaggtagcccaccgcactca
ccacgggaaaatggcttagataaatctcgcctattaaaaaaggatgcacctataagtcca
gcttcaattgcttcctccagtagtactccttcttcaaagtccaaagaaattggtcttaat
gagaaatcaactactccagtatcaaagtcgaacactccaactccacgaacagatgctcct
actccaggaagtaattccactccaggattgaggccagtccctggtaaaccaccaggaatt
gatccattaggtttgaggactcccatggcagtaccatgcccttatcctgctccttttgga
atagtgccccacgctggtatgaatggcgatctgacaagcccaggggcatatgcaggttta
cacaatatctcccctcagatgagtgcagccgcagctgctgcagcagcggcagctgcttac
ggccgatctccagtggttggttttgatccacatcacatacgcgtacctgggattccacca
aacttaagtggcattcctggtggaaaacctgcttattcgttccatgtaagtgctgatgga
caaatgcaacctgtgccttttcctcctgatgccctaattggacctggaattccaagacat
gctcgacaaatgaactctctgagccatggtgaggttgtgtgcgcagtgaccatcagcaat
cccacgagacatgtgtacactggcgggaaaggatgtgtgaaggtctgggacattagtcac
cctggaaacaagagcccagtctctcaactggactgcctgaacagggacaactacattcga
tcatgcaagttattacctgatggccgtaccctgattgttggtggggaagccagtacgtta
tctatctgggacctggcagctccaactcctcgtataaaggcagagttgacatcctctgct
cccgcctgctatgctctggctatcagtcctgactccaaagtctgtttctcctgctgtagt
gacggtaatattgctgtatgggacctgcacaatcagacattagtcaggcagttccagggt
cacacagatggagccagctgcattgacatttcaaatgatggtactaaactttggacggga
ggtttagataacactgtaagatcctgggatctcagagaaggaaggcaactgcagcagcat
gacttcacgtctcagatcttttcattgggatattgccccactggagagtggcttgcagtt
ggaatggaaaacagcaatgtagaggttctgcatgtgacaaagccagataaataccaattg
catctccatgaaagctgtgtgctgtcccttaagtttgctcattgtggtaagtggtttgta
agcactggcaaggataatctactgaacgcctggagaacaccttatggagcgagcatattt
cagtcgaaggagtcctcttcagtgctgagctgcgacatctcagtggatgataaatacatt
gtcactggctctggggacaagaaggctacagtctatgaagttatttattag
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integrated database retrieval system
