Rhincodon typus (whale shark): 109938214
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Entry
109938214 CDS
T06055
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rtp01001
]
109938214 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rtp04054
]
109938214 (ciita)
Enzymes [BR:
rtp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
109938214 (ciita)
Protein kinases [BR:
rtp01001
]
Serine/threonine kinases: Other
TAF1 family
109938214 (ciita)
Pattern recognition receptors [BR:
rtp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
109938214 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
NB-ARC
LRR_14
AAA
nSTAND_NTPase5
AAA_16
nSTAND6
nSTAND3
AAA_22
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
109938214
NCBI-ProteinID:
XP_048448779
LinkDB
All DBs
Position
Unknown
AA seq
906 aa
AA seq
DB search
MNTYSQTVSPEVSAIVPGFPSPQSVDIQSSPESMTSAQLVDSPTSPVSVDSERLDLEIES
SGEESSGPTNPTIKSYGKTKGVEACIEMVKEYLRDMSQHSYICHEHDEMLLEDIYVDVTM
VEVQAENKSAKNASKCLDKECKIYDIAERERGAVNLSNLFDVSGKRPRETKIVALLGRAG
IGKSVLVQKICHDWVNGSFRQFEFVFWFKCRMLNFAKQNTLKDLLFHPFLPTLKNTDEVF
QYLCHNSRKVLLILDDFEDLYYHDGLLQPSVCGSAERPHTVKQLFAGLLQKKLLKGCTIA
ITARPKETFNQYLGRVDKIVEVLGFRPHHVQEFLHRYFEDSSAAEAVACLQEQGYLLSFC
STPLLCRFICFVLKAQHQTGDGRLVLPSTLTHLFLNIFHVLLQGKTQNVVALHRQNILEL
SKHAFAGVQCHYNVCMTSRAVEMSNFALKHGFLRPFLMTGEGKGQECGKTFSHSFLQNFL
AGLYLLFSEDVKCKGLMKLISLEHRKRKSQADWLDVVRRFLVGLAFQEGNDFLHSFAHHP
KANVKGKKQKSLQKYLAELDVSALSTSKLLELCHCVYETQSTELTERVAAKLGQRLSFRG
TRLTPADIFVLLYIMRSSPNNFAVDLRETNIDLTGIQQFAELRNVTSFRVSVCDAIKLWE
HLEQNGLRELLRQSLLKFSVNPFEIKSLKDIDDLDLLVQIHKDRRFLLSTHDTSGGELYE
LPAVRTLQVLEFALGPVDGPQGFQKLTKILPALAFLKYLDLEGPSSQKVKMSENKIGDEG
AERLAKVLSNLTSLEKLTLSRNQIADRGAQELARSLPSLKFLKTLSLYDNIIGDKGAEKL
AEILPVMKSLKVLDVKFNKITDAGAQRLTQSLKDCPHIETIWLWSPTITHWMSVHIQQID
VRINLQ
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatactcacagactgtcagtcctgaagtcagtgcaattgttccaggtttcccc
agccctcaatctgtcgatattcagagctcaccagagtccatgaccagtgctcagcttgtg
gatagtccaacctctccagtctctgtggacagtgagagactagatctcgaaatagagtca
tctggtgaagaatcatcaggaccaacaaatccaacaatcaagtcatacggcaaaacaaaa
ggtgtagaagcctgtatagaaatggtgaaagaatatttgagagacatgagccaacactct
tacatttgccatgaacatgacgaaatgctccttgaagacatttacgtggatgtcacaatg
gttgaggttcaagctgaaaataagtctgcaaaaaacgcctctaagtgtttggacaaggaa
tgcaaaatctatgacatagcagagcgagaaagaggtgctgtaaacttgagcaatctcttt
gacgtttcaggaaaacgaccaagagaaaccaaaatcgttgccttactggggagagcaggg
atcggtaaaagtgtacttgtccaaaaaatctgccacgactgggtgaacgggtccttcagg
cagtttgagtttgttttctggtttaagtgcaggatgctcaattttgcaaagcagaacact
ttaaaagatttacttttccatccattccttccgacattaaagaacacggacgaggttttt
caatatctctgtcacaattcccgcaaagtcctgctcattttggatgactttgaggacttg
tactaccacgacggcctcctgcagccttcagtgtgtggctcagcggagagacctcacact
gtcaaacagctgtttgctggcctcctccagaagaagctgctgaagggttgcacgatcgct
attacagcaagaccaaaagaaaccttcaaccagtacctcggaagggtggacaaaatagtg
gaggtgctgggctttcgcccacaccacgtacaggaattcctgcacaggtactttgaagac
tcctcagctgctgaagccgtggcatgtcttcaggagcagggttacctgctcagcttctgc
tccacccctttattatgcagattcatctgtttcgttctgaaagctcagcatcagactgga
gatgggcgtttggtgttaccgtccactctcactcatttatttctgaacattttccacgtc
ctgctccagggtaaaactcaaaatgtcgtggctttgcacaggcagaacatcctggagttg
agcaaacatgcctttgcaggggttcagtgccattacaatgtctgcatgacctccagagca
gtagaaatgtccaactttgctttgaagcacggcttcctaagacccttcttgatgactggc
gaaggaaaggggcaggagtgtgggaagactttctctcattctttcctgcagaacttcctg
gcagggctttacttgttgttttctgaagatgtcaagtgcaaagggttgatgaagctaatc
tccttggagcacagaaagcggaaatctcaagcggactggctcgacgtcgttcgcaggttc
ctggtgggactggcttttcaggaaggaaatgatttccttcacagcttcgcccatcatcca
aaagctaatgtcaaaggcaagaagcaaaagagcctgcagaaatacttggctgaactcgac
gtctctgcgctcagcaccagtaaattgctggagctttgtcattgtgtttacgaaacccag
agcactgagctgactgaacgggtagctgctaaactcggccagagattgtccttcagaggc
acaaggctgactccagctgacatcttcgtactgctctacataatgcggagctcaccgaat
aactttgctgtcgacctgagagaaacaaacatcgacctgaccggaatccagcagttcgcc
gagttgaggaatgtcacctcattcagagtgtcagtatgtgatgcaataaaactttgggaa
catttggagcaaaatgggttacgtgagctgcttcgtcagtcacttcttaaattttctgtg
aatcctttcgagatcaagagtttgaaagatatagatgaccttgatttactggtacaaatc
cataaagatagaagattccttttaagcacacacgacacatctggaggcgaactctatgag
ttacctgctgtcaggacattacaagtgctggagtttgctcttggcccagtggatggaccc
cagggatttcaaaaattaactaagattctaccagctctggcatttttgaagtatctagat
cttgaaggaccaagctcgcagaaagttaaaatgagtgaaaacaaaattggagatgaagga
gctgagagattggcaaaggtgttgtctaatctaacatcactagaaaaactgacattgtca
cgtaaccagatagcagaccgaggagcacaggagctggcgagatcacttcccagcctgaag
tttttaaagacactgagtctctatgacaatatcattggtgacaaaggggcagaaaaatta
gcagaaatactcccagtaatgaagtcactaaaagttttagatgttaaattcaataaaatc
acagatgcgggagcacagaggctcacacagagtttaaaagactgtccccatattgagaca
atatggctatggagcccgacaattacacactggatgtctgtacacattcaacagattgat
gttagaattaatttacagtag
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integrated database retrieval system
