Rhincodon typus (whale shark): 109938235
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Entry
109938235 CDS
T06055
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53 isoform X1
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
rtp03037
]
109938235
Cilium and associated proteins [BR:
rtp03037
]
Other cilia and associated proteins
Stereociliary proteins
109938235
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Motif
Other DBs
NCBI-GeneID:
109938235
NCBI-ProteinID:
XP_020392270
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All DBs
Position
1:complement(113435103..113519672)
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AA seq
1104 aa
AA seq
DB search
MAWMKNFLKPGGNLRSGYQPGSMLSIAPPKGLLNGPGENSCFLNSAVQILWHLDIFRRSL
RLLPGHVCSGNACIFCALKNIFVEFRNSREKALPSDILRNALAESFKDEHRFQLGLMDDA
AECFENILERIHLHIVSDTEMDTCTVKSCITHQKFAMTLYEQSVCHSCGATSDPLPFTEL
VHYVSITALCNQVDRMIERNERPRPESFAELLQAASTIGDFRNCPSNCGQKIKIRRVLMN
CPEIVTIGLVWDSENSDLTSDVIRYLAPQLFLPGLFFQATDERAKRSELVLVGMVCYSSR
HYCTFAFHTKSSKWIFFDDATVKEVGSKWKDVLSKCVRGHFQPLLLFYANPNGLPVNMED
VTIHNLQSAHCRTDGEDSEKEMQISAARLIDHVREGGTEGQLSKTSHQKMPPKQPSNTKG
GFQRGFIQDSRGRGLIKVFPDENPFRFRDRSKDQAQKPHNARSSSQPLKIENDKLTRRAD
YGRQKEDRSPSKSGTPPHGNGLKHFWDQHVHSGHRKGPSSEGRATPQPTAPSNRLFYASD
NKNKSSSFSEYDIDSQDSRDKGNGRNRSKGKVWKPSRETLNVDSIFEDGNKRQSSPKHRS
SSSNQPQHNRGLNAHDVLRENRKHKELMTIYEDELKQGSVSSLEADGKSNPEKDKSNMTE
TSCQVQKIEAGYESNDRLSNNSVSYNALAMETFNGKHLKNIQDSFSNRCQQELYKPNACP
NHSLRFPVNEVEMQNKESKQRDEIVEGLNMQRSQFGMDRLTKGQASPLVERSWKSAPLPK
QNTQFHESSGMYLQNHRFCKNDPNPLQQQLKQAPTDKPVPNISAKSNNEDISVPQDHVFP
SKDFKKIVYGKNSGYNFPMSLDSADHWIPPHLQHMEINAVTPPTGSLVHLHPASRSSEKS
QLDQCLLSEGLSSYHGCEKRENFLESTRQERSSSPPPLPPKMYNRRAPSNLDSSALSVKS
MDELREQKENVSILTKVATCVKSRFMDDATVPLNEVPRRISDQGQISSSAEKSNHEAYVP
DDSAVFATSAPSVGLDKHVAPTTYFSVDYCMTDTYRLKYHGRPKLFFADLKSSESQQGAE
NPFQGSSVTTSQMIPSPGKGNSHS
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atggcctggatgaagaacttcctgaagcctgggggtaacctgcggagcggctaccagccc
gggagcatgttgtccatcgccccgcccaaagggcttctgaacggacccggagagaacagc
tgcttcctcaacagcgcggtgcagattctgtggcatctggatattttccgacggagttta
agactgctgcctggacatgtatgttcagggaatgcttgcattttttgtgctttgaagaat
atatttgtagaatttcgaaacagtagggaaaaagcccttccctctgatattttgcgaaat
gctctggctgaaagttttaaagatgaacaccgtttccagctcggtctaatggatgatgca
gcagaatgctttgagaatattttggagagaattcatttgcacatcgtttcagacactgaa
atggatacatgcactgttaagtcttgcatcacccatcaaaaatttgccatgactctttat
gagcagagtgtgtgccatagctgtggagctacgtcagatcctttacctttcactgagctg
gtacattatgtctcaattacagctctatgtaatcaggttgacaggatgatagagaggaat
gaacgtcccaggccagaatcgtttgcagagctacttcaggcagcaagcactattggtgac
ttcaggaattgtccgagtaattgtgggcagaagataaagatcagacgtgtgctaatgaat
tgcccagagattgtcaccattggtttagtatgggattctgagaattccgatctcacatca
gatgtgattcgatatttggcacctcagctttttctccctggacttttcttccaagcaact
gatgaacgggctaagagaagtgaattggttcttgttggaatggtatgctattccagcaga
cactattgcacctttgcctttcatacaaaaagctccaagtggattttctttgatgatgct
acagttaaggaggttggatcaaagtggaaagatgtgctttccaagtgtgtccgaggtcac
ttccaacccctgctgttgttttatgctaatcccaatggtttgccggtcaatatggaggat
gtaacaattcacaacctacagtctgctcactgtagaacagatggagaggattcagaaaaa
gaaatgcaaatatctgctgccagattgattgaccacgtaagggaaggtggaaccgaaggc
caattgtcaaaaacaagtcaccagaaaatgcctccaaaacaaccatctaatactaaagga
ggcttccagaggggtttcattcaagatagtcgaggtcgagggctaattaaagtatttcct
gatgaaaatccttttcgattccgagaccgttcaaaagatcaggctcaaaagccacacaat
gcgaggagttcttcacaacccctgaaaatagaaaatgataagctaacaagaagagctgac
tacggcagacagaaagaggatagatctccttcaaaatctggaacgccacctcatggaaac
ggtctgaaacatttctgggatcaacatgtacacagtggtcacaggaaaggaccttcgagt
gaaggtagagctactccacaaccaacagcaccatcaaacagattgttttatgcttctgac
aataaaaacaaaagcagcagcttcagtgaatatgatattgatagtcaagattcaagggac
aaaggcaatggtaggaatagaagtaagggtaaggtttggaaaccatcacgggaaacactg
aatgtggacagtatttttgaggatggaaacaaaaggcaaagcagtccgaagcacagatca
agttcttctaaccaaccacagcataacagaggactgaatgctcatgacgtattgagagag
aacagaaaacacaaagaactaatgaccatatatgaagatgaactcaaacaaggaagtgta
agttctttggaggcggatggaaaatcaaatccagaaaaagacaaaagcaacatgactgaa
accagttgtcaagtgcagaaaattgaagcagggtatgaaagcaatgatcgactcagcaat
aactcggttagttataatgctttggccatggaaactttcaatggaaagcacttgaagaat
attcaagattcatttagcaacaggtgtcagcaagaattatacaaacctaatgcgtgtccc
aatcattctctcaggtttccagttaatgaagttgaaatgcagaacaaggagtcgaaacaa
agagatgagattgttgaaggacttaacatgcagagatcgcagtttggtatggataggctc
actaaaggccaagcctcacctttggtagaaagatcctggaaatctgctcccctccctaag
caaaatacacagttccatgagtcatcaggaatgtacttgcaaaaccacaggttctgtaag
aatgatccaaatccactacaacaacaattgaaacaagcacccacagacaaacctgttcca
aatatttcagccaagtccaacaacgaagatatatctgtgccacaagatcatgtatttcct
agtaaagatttcaagaagattgtttatggaaaaaattctggttacaattttccaatgtca
ctggattctgcagatcattggattcctccccatttacagcatatggaaataaacgcagta
acaccaccaactggatcactagtacatttgcatccagctagtcgatcctctgagaaatct
cagcttgatcaatgcctgctgtctgagggcctaagctcatatcatggttgtgaaaagaga
gaaaatttcctagaatctacccgtcaagaaaggtcatcatcaccaccacctttgcctcca
aaaatgtataatcggagagccccatccaatttggacagcagtgccttaagtgttaaatca
atggatgagctaagagagcaaaaggaaaatgtttctattttgacaaaagtggctacatgt
gtaaaatccaggtttatggatgatgcaacagtgcctctgaatgaggttccaagaaggatt
tctgatcaaggacagatttcaagttctgctgaaaaatctaatcatgaggcgtatgtgcct
gatgattctgcagtgtttgcaaccagtgctccttcggtaggactagataaacacgttgct
ccaacaacctatttttctgtggattattgcatgactgatacttacagactcaaataccat
gggagacctaaactcttctttgcagatttgaaatctagtgaatcacagcagggagcagaa
aatccctttcaaggttcatctgtgactacatctcaaatgattcctagccctggaaaagga
aattctcattcataa
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integrated database retrieval system
