Rhincodon typus (whale shark): 109938262
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Entry
109938262 CDS
T06055
Symbol
zfpm1
Name
(RefSeq) zinc finger protein ZFPM1 isoform X1
KO
K17441
zinc finger protein ZFPM1
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109938262 (zfpm1)
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
109938262 (zfpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCHC_ZFPM2
zf-C2H2
zf-C2H2_4
zf-met
zf-H2C2_2
zf-C2H2_jaz
zf-H2C2_5
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
109938262
NCBI-ProteinID:
XP_048461788
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All DBs
Position
15:27369615..27485006
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AA seq
999 aa
AA seq
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MAAILATAVVNKDIFPCKSCGIWYRSERNLQAHLMYYCASRQKSTSTPPEEKLKDPSPHE
RICPFPQCNKSCPSASSLEIHVRSHSGERPFVCLICLSAFTTKANCERHLKVHMDTLNGI
CHGCGFVSTTRDTLYNHLLMNHMTCQPGSKGDSYSPRSGLPPLPLTDVKVAHSFLSLKCN
QCEYVGDSESSLQQHMSLHVVQDTFQCNQCHKKLRNAVELAKHMELHQDNESQNNMEETK
DEDDGTSPVLSREVPEELNIVVKVKEEPLSLQCESEGDRTMEEGQENPIPDRSSNVSSPR
NTLIAKVKSECSSPTQASSPVHCGTGSIMPEGTVLIPYMFNHETSTFPQASEILAKMSEL
VHSRLKQGVNNYPLLYAGAPIQKGATCYECDITFNNINNYLVHKRLYCSSRHQQVDNATV
DETAKDSTSISRAEQLSHSPASGVESQHASSSKTDSERDLRISNVESKPPEVKNEDSAMK
DTSSEGESLSRFSEGSRSPSNSVEDFDDDPSKTVCEACNIRFTRHETYVVHKRLYCASRH
DPPVRRPNAGKVAFLQQTVRTRKRRKLYEIHGSSHQPLLPPSPNEASVHSPSAASLQSTG
LPNNVEALKVKQEAFSLSSRSTDSLSLSTGYMLTAQSSATSSPSSSSDVDGPIDLSRKPR
IQEEPLIHVSPLHPASHLSTDYHECTSCKISFNNVENYLTHKKYYCSATTLQHSKVENLA
RVKMQASATIKAKKNRMEITDPQPQMQTEELKKKDISTKCILESPNVVHGSMTPNNSPGM
YLNSPDALQDGTQSSSHVKTFSGPQRAHSVICPYCPLNGPIEGDLIDHFKNAHDFKQLST
GHTTEGFMQDISSQSKLMTNNISEVSPQNLRAPASSFKSGAQTLKNIPNAKDQREPVCSQ
SSVENPLQNISPKSLITSSPNIALKILPVPDSPRNPGFKLISPSINVDKSVQTAMSLPSP
VQNGNHRYCRLCNIKFSSLSTFIAHKKYYCSSHTAEHVK
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaatattagcgactgcagttgtcaacaaggacatctttccttgtaaatcctgt
gggatttggtatcgaagtgaaagaaacctacaagctcacctgatgtattactgtgctagc
cggcagaaatctacatcgactcctccagaagaaaagctcaaggatccttctccacatgag
cgcatctgtcccttcccgcaatgcaacaaaagctgtcccagtgccagttccctggaaatt
cacgttcgtagtcacagtggtgaaaggccatttgtgtgtctaatctgtctgtcagcattt
acaacaaaggcaaactgtgagcgacacctgaaagtacacatggacaccctaaatggtatt
tgtcatggctgtggatttgtctccaccacaagagataccctgtacaatcatctacttatg
aatcatatgacttgccagccaggttcaaagggtgactcatattcaccaaggtcaggccta
cctccccttcccttgacagatgtgaaagtggcacattctttcctgagcctcaaatgtaac
cagtgtgagtatgttggggattctgaatcaagcttgcaacaacatatgtcattgcatgtt
gtacaagacacatttcagtgcaatcaatgccacaagaagttaagaaatgctgtggaatta
gccaaacacatggaacttcatcaagacaacgagtcacagaacaatatggaggaaacaaag
gatgaagatgatgggacatctccagttttaagtagagaagttcctgaggagcttaatata
gtagtgaaagtcaaagaggaacctctcagtttgcagtgtgaaagtgaaggtgataggact
atggaggagggtcaggaaaatcccattcctgaccggtcctccaatgtttcctcaccaaga
aatacattgatagcaaaagtgaaatcggaatgttcaagtccgacgcaagcgtcaagccca
gtccactgtgggacaggttcaattatgccagaaggcactgtcctaataccctatatgttc
aatcatgaaacatctacatttccacaagcttcagaaattttagccaagatgtctgagctg
gttcacagcagactaaagcaaggggtcaacaattatccacttctttatgcaggagcacct
attcaaaaaggagcaacatgctatgaatgtgacattacattcaataatatcaacaactac
ttagtgcacaaacggctctactgttctagcaggcaccagcaagtagacaatgctactgtt
gatgagacagcaaaggattctacatccataagtagagctgaacagctatctcatagtcca
gcttcaggagtggaaagccaacatgcctcttcctcaaagactgattctgaaagagaccta
agaatatcaaatgttgagagcaaaccaccagaagtcaaaaatgaggacagcgccatgaag
gatacctcatcagaaggggaaagcctaagtagatttagtgagggcagtcgaagtccaagc
aactctgttgaagattttgatgacgacccttccaaaactgtttgtgaagcctgcaatata
agatttacacgacacgaaacctatgttgtacataagcgtttatattgtgcttcgagacat
gaccctcctgttcgtaggccaaatgcaggaaaggtggcgttccttcagcaaactgtacgt
acgcgtaaacgtagaaagttgtatgagatccatggttctagtcatcagcctcttcttcca
ccttccccaaatgaagcatctgtccatagtccttcagctgccagccttcaaagcactggg
ctacctaacaatgtagaagcactgaaagtcaagcaagaagctttctcactttcttcaagg
tcaactgattctctttccttatcaacaggttatatgttaacagctcagtccagtgcaaca
tcatcaccaagttcaagttcagatgttgatggaccaattgatcttagcagaaagcctcgt
attcaggaagaaccattgattcatgtttcccctttgcatccagcctctcatctgtcaaca
gactatcatgaatgtacctcctgcaaaattagttttaacaatgtagaaaactatcttact
cacaaaaagtattactgctctgcaactactcttcagcacagtaaggtagagaatcttgcc
agagtaaagatgcaggcttctgctacaataaaagctaaaaaaaataggatggaaattaca
gaccctcagccacagatgcaaacagaggaattgaaaaagaaagatataagcactaaatgt
attttagaaagtccaaacgtagtacatggctctatgactccaaacaactctccaggaatg
tatctcaatagtccagatgctttgcaggatgggactcagtcatcctcccacgttaagacc
ttctcagggcctcagcgtgctcattcagtcatctgtccctattgcccacttaatggacca
attgaaggagatcttattgatcattttaagaacgctcatgatttcaagcagctttcaact
ggacacacaacagaaggtttcatgcaggatatttcatcacagagtaaactcatgacgaac
aatatttctgaagtcagtcctcagaatttgagagctcctgcctcatctttcaagtcaggt
gcacaaacactgaagaatatcccaaatgccaaagatcaaagagaacctgtctgttcccaa
tcttcagttgaaaatcctttgcagaacatctcacctaaatctttaataacatcctctcct
aacattgctttgaaaatattaccagtgcctgacagccccaggaacccaggctttaaattg
atcagcccatcaattaatgttgacaaatctgttcagacagcgatgtcactcccaagccca
gtgcaaaatggaaatcacagatactgtcgtttgtgcaacatcaagttcagtagtctttca
acgtttatagctcacaagaagtattattgttcttctcacactgcagaacatgtcaaataa
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