Rhincodon typus (whale shark): 109938316
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Entry
109938316 CDS
T06055
Symbol
lamp1a
Name
(RefSeq) lysosome-associated membrane glycoprotein 1a
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03272
Virion - Hepatitis viruses
rtp03273
Virion - Lassa virus and SFTS virus
rtp04140
Autophagy - animal
rtp04142
Lysosome
rtp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
109938316 (lamp1a)
03272 Virion - Hepatitis viruses
109938316 (lamp1a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
109938316 (lamp1a)
04142 Lysosome
109938316 (lamp1a)
04140 Autophagy - animal
109938316 (lamp1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109938316 (lamp1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109938316 (lamp1a)
04090 CD molecules [BR:
rtp04090
]
109938316 (lamp1a)
Membrane trafficking [BR:
rtp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
109938316 (lamp1a)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
109938316 (lamp1a)
Other autophagy associated proteins
RNautophagy/DNautophagy
109938316 (lamp1a)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
109938316 (lamp1a)
CD molecules [BR:
rtp04090
]
Proteins
109938316 (lamp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
GbpC
PH_RDR2
Motif
Other DBs
NCBI-GeneID:
109938316
NCBI-ProteinID:
XP_048458572
LinkDB
All DBs
Position
11:complement(72648615..72675392)
Genome browser
AA seq
337 aa
AA seq
DB search
MTAPVLVVSFGNGHSLSMNFTRHNGSYKMDVLTVSFNESDNVHFPNASSKGILVTFSRSA
DISAKMNTTYRCTSDSTVHMKNVNVTLSHVRMEAFPSNDNFSKTETICHADMPPTVPSTT
LVTTLAPTTVTPPTSNPIPGVYNVTNSNGTCLLAKMGLQINITYTTLLNESIMKVFNILP
NSTHADGNCSSDRASLQLTDDPTKLIFVFVVNTTTNKFYLKELSISTRIPSTAQGKEITA
KNDSLTYLQTTLGKSYMCHSEQTLQVNPNLSINTFELHIQPFRVNDAKYGTAEECQMDKD
DMLIPIIVGAALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgccagtactggtagtgagttttgggaatggtcattctctcagcatgaacttc
acaaggcacaatggatcctacaaaatggatgtactgactgtttctttcaatgagagtgat
aacgtacatttcccaaatgcaagttctaaaggtattctggtaacattttcaaggtctgca
gatatcagtgcaaaaatgaacacaacgtacaggtgtacaagtgattctactgtacacatg
aaaaatgtaaatgtaactttgagtcatgtccgaatggaagcttttccgtcaaatgataat
ttcagtaaaactgaaactatatgccatgctgatatgcctccaactgtacctagtacaacg
ctagttaccaccctggctccgacaactgtaacacctccgacatcgaatccaattccagga
gtgtataatgtcaccaatagcaacggcacctgcctgcttgcaaaaatgggactacagatc
aacattacatatacaaccttacttaatgagagcataatgaaagtttttaacatcctgcca
aactctacacatgcagatggaaactgcagcagtgatcgtgcctctctccagttgaccgat
gacccgactaagctgatttttgtgtttgttgtgaatactactaccaacaagttttaccta
aaggagctttccatttccacaagaattccatctactgctcaaggaaaggagattactgct
aaaaatgacagtcttacctacctacagacaaccttaggcaaatcttatatgtgtcattct
gaacaaacactgcaggtgaacccaaacctctccatcaatacatttgagctccacattcag
ccattcagagtaaatgatgcaaagtatggaactgctgaagaatgccaaatggataaagat
gacatgttgatcccaatcattgttggtgctgctcttgctggccttgtgctgattgtgttg
attgcttatctgattggaaggaagaggagccatgctggataccaaaccatctaa
DBGET
integrated database retrieval system
