Rhincodon typus (whale shark): 109938367
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Entry
109938367 CDS
T06055
Name
(RefSeq) carnitine O-palmitoyltransferase 1, liver isoform isoform X1
KO
K08765
carnitine O-palmitoyltransferase 1, liver isoform [EC:
2.3.1.21
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00071
Fatty acid degradation
rtp01212
Fatty acid metabolism
rtp03320
PPAR signaling pathway
rtp04148
Efferocytosis
rtp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
109938367
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
109938367
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109938367
03320 PPAR signaling pathway
109938367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rtp03029
]
109938367
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.21 carnitine O-palmitoyltransferase
109938367
Mitochondrial biogenesis [BR:
rtp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
109938367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
CPT_N
Motif
Other DBs
NCBI-GeneID:
109938367
NCBI-ProteinID:
XP_048473369
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Position
37:complement(12345425..12441859)
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AA seq
772 aa
AA seq
DB search
MAEAHQAVAFQFTVTPEGIDLRLSHNALKEIYLSGIRAWKKKCIRIKNNFASGVYPASPS
SWLFVVLTVLGTMYTRVDPSMGMIGKLKDHLPLRRYMSHQGQNLVSALLFATGLWLALIF
VMRQILKCLLSYHGWMFEEHGKVSTTTKVWFTLVKIFSGRKPMLYSFQNSLPRLPVPAVK
DTLRRFLESVRPLMTDEDFRRTKALAKDFEQNLAPRLQWYLKLKSWWATNYVSDWWEQYV
YLQGREPIMVNSNYYAMDFLYVTPTTSQAARAGNLAHALLLYRRRLTYEEILPSTLPGFP
IPLCSAQWERMFNTTRLPGEETDFIQHRVDSKHIVVYHKGRYFKVWVYQGGRLLNPCELQ
IQFQYILDENSSPQPGEKYLAALTAGNRIPWAKARKTYFSSGKNKTSLESVEKAAFFVTL
DDTKYDLYVDNQVKSLDEYAKSLLHGKCYDRWFDKSFTFIVFANGKVGLNAEHSWADAPI
IGHLWEYALATDSFQLGYDGDGNCKGEADTTLLLPQRLQWDIPKECQEVIMYSLKVAQKL
ADDVDFYAFPFTKFGKGMIKKCRTSPDAFIQIALQLANFRDKGSFCLTYESSMTRLFREG
RTETVRSCTVESSNFVTSMESEKFSVDECLHLFRIAAKNHQHISRLAMTGCGVDRHLFCL
YVVSKYLGVNSPFLQEVLSEPWCLSTSQTPIQQIELFDLVNHPEYISIGGGFGPVADDGY
GVSYIIVGENLINFHISCKVSSPLTDAHRFGKHIVQAMSDILALFNLDARKP
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagctcaccaggccgtcgcatttcagttcacggtcaccccagagggcattgac
ctccgactgagccataatgcattgaaagagatctacctctcgggcatcagggcctggaaa
aagaaatgcatcaggatcaagaacaattttgcaagtggtgtctaccctgctagcccatcc
agctggctttttgtggtattgactgtacttggtaccatgtatacaagagtcgacccctca
atgggaatgataggcaaacttaaggaccatctccctctaagaagatatatgtcacaccag
ggtcaaaatctggtgagtgcactgctgtttgcaacaggactatggctggcactgattttc
gtgatgagacagatcctcaagtgcctcctctcctaccatggctggatgtttgaagagcat
ggcaaggtgtccactactaccaaagtctggtttacactagtgaagatcttctcgggacgt
aaaccaatgttatacagtttccagaactcccttccacgtctgcctgttccagccgtaaaa
gacaccttgagaaggtttttggagtcagtgaggcctttgatgaccgatgaggacttccga
cggacaaaggccttggcaaaagattttgaacagaacttggcaccccggctgcaatggtac
cttaaactgaagtcttggtgggctaccaactatgtgagcgattggtgggaacagtatgtc
tacctacaaggtcgagagccaatcatggttaacagcaactattatgccatggatttcttg
tatgtgactccgacaacaagtcaagctgcgcgtgctggtaatctggcccatgctttactt
ctttacagacgacgacttacttatgaggaaattctaccgagtactctgccagggttccca
atacctctgtgttcagcacagtgggaacgaatgttcaacacgactcgactgccaggcgag
gagacagactttatacaacaccgtgtggacagtaagcacattgtggtctatcacaagggt
cgttattttaaagtttgggtatatcaaggcgggcgccttctgaatccatgtgagctacag
atccaattccagtacattttagatgagaattcttcacctcagcctggggaaaagtatctg
gctgcattgactgcaggaaacagaattccctgggctaaggctcggaaaacatacttcagc
tctgggaagaacaagacttcactggaaagtgtggagaaagcagcattttttgtcactttg
gatgatactaaatatgatctatatgtggataaccaggtgaaatcactggatgaatatgcc
aagtcactgttgcatggcaagtgctatgacagatggtttgataaatcattcactttcatt
gtgtttgcaaatggcaaagtgggattaaatgcagaacattcctgggctgatgcaccaatc
attggacatctatgggagtatgcattggccacagacagcttccaactgggatatgatggc
gatggtaactgtaaaggcgaagcagatactactctattattgccacagagactgcaatgg
gacatcccaaaggagtgccaagaagtgatcatgtattctctgaaggtggcgcagaagctg
gctgatgatgttgatttctatgcattccccttcactaagtttggcaaaggtatgattaag
aagtgccgaaccagtcctgatgccttcatccagattgcattgcagctcgccaacttcagg
gataaaggttcattctgcttgacctatgaatcctcaatgacacgactgttccgtgagggg
aggactgagactgtacgctcgtgcacagttgagtcatccaactttgtgacatccatggag
agtgagaagttttcggttgatgaatgtctacacctgttccgtattgctgccaaaaatcac
cagcacatcagcagacttgccatgaccggatgtggtgttgatcgtcacctcttctgcctc
tacgtggtgtccaaataccttggagtcaactcgccattccttcaagaggtgctttcagaa
ccatggtgtctgtcaacaagccaaacacccatccagcagattgagctatttgaccttgtc
aatcatccagaatacatctccatcggaggtggttttggcccagttgcagacgatggttat
ggtgtttcttatattatcgtcggagaaaatctcatcaacttccacatctcttgcaaagtc
tccagcccgttaacggacgcacatcgttttggtaaacacatcgtacaagcgatgtctgac
atcctcgcactgttcaacctggatgcaagaaagccctaa
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