Rhincodon typus (whale shark): 109938405
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Entry
109938405 CDS
T06055
Name
(RefSeq) gastrula zinc finger protein XlCGF7.1-like
KO
K09191
general transcription factor IIIA
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rtp03000
]
109938405
03021 Transcription machinery [BR:
rtp03021
]
109938405
Transcription factors [BR:
rtp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
109938405
Transcription machinery [BR:
rtp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
109938405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_ZN142
zf-met
zf-C2H2_8
DUF7129
Cas12f1-like_TNB
C2CH-3rd_BIRD-IDD
XPA_N
zf-C2H2_11
DUF7479
DUF7630
zf-LYAR
BDHCT_assoc
Motif
Other DBs
NCBI-GeneID:
109938405
NCBI-ProteinID:
XP_048475274
LinkDB
All DBs
Position
42:complement(8465612..8512812)
Genome browser
AA seq
277 aa
AA seq
DB search
MCFHCVPVFSHSSNLWIHKDSRTMEKPLEREDCGKGFRSPSALKVHRHNHTGEKPFTCSV
CAKGFTSSFKLLSHQQVHSDERPFKCTDCGKKFKSSRLLASHKAVHTSERPFSCSHCGIR
FKQSSHLYRHRRVHTGERPFACSKCGMTFIRSSHLLKHQQVHTKERPFTFSSCEKSFKSS
NGLQLHQLIHLEKRPFSCLVCGKGFIQSTHLLTHQRVHSEERPFKCQDCGKCYKRSGDLM
CHQRVHTEDKPFRCSHCGTGFKRSGHLLRHQRLHTGE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttcattgtgtaccagtcttcagccattcttccaacctgtggattcacaaggac
agccgtaccatggagaaaccgttggaacgtgaggattgtgggaagggattccgatccccg
tctgctctgaaggttcatcgacacaaccatactggtgagaaaccgttcacctgctcagtg
tgtgcaaagggattcacttcctcattcaaacttctctcacatcagcaagttcactctgac
gagagacctttcaaatgcacggactgcgggaagaagtttaaaagttcaaggttactggca
tcccacaaagccgttcacaccagcgagagaccattcagctgctctcactgtgggattcgg
ttcaagcagtcatctcacctgtacagacatcggcgggttcacactggggagaggccgttt
gcctgcagcaagtgtgggatgacattcattcgatcgtctcacctgctcaaacaccagcaa
gtccacacaaaggagagaccttttacgttctcaagttgcgagaagagctttaaaagcagc
aacggtcttcagctccatcagctcattcacctcgagaagagaccgttcagttgcttggtg
tgtgggaagggatttattcagtcgacccatctgctgacacaccagagggttcacagtgaa
gagagacctttcaaatgccaggactgtgggaagtgctacaaaaggtccggggacctgatg
tgccaccaacgtgttcacaccgaggacaaaccgttcaggtgttctcactgtgggactggg
ttcaagaggtcgggtcacctgctgagacaccagcgacttcacactggggaatga
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integrated database retrieval system
